Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g2680 ATGATGAGCAAGAAGATGAGGTTTGTTAAGAAGAACAAGAATGGAGTGAGATTATTGCCACCTGGATTTAGGTTCCAACCAACAGAAGAGGAGCTTCTATTTCAGTATTTGAAATGCAAGGTTTTCTCTTTTCAGTTGCCAGCTTCAATCATTCCTGAGATCAATGTATGCAACTATGATCCTTGGGATTTGCCAGGGAATAATAATAATTATGGGGAGGAAGAAGAGAGATACTTGTTCAGCTCAAAGGAAGTTAAGTATAGAAACGGTAACCGAATGAACAGAATAACGAAATCTGGATATTGGAAAGCAACTGGATCAGACAAAAGAATAATTTCAACATCATCCAATAATAATAATAATAATAATATTGTTGGGATAAGAAAAACTCTTGTATTCTATCATGGAAAATCTCCAAATGGCTCTAGAACTCATTGGATCATGCGTGAGTATCGACTTGTCACTACTCCTTCTAATTCATCCCAGTATGTAGAAGACTTAGGGAATTGGGTTCTTTGCCGCATATTCAAGAAGAAAAGAAGCATAGAAAGTCAACATCACATGGTCAAGAACAAAATTAATAATAATGTTGTCGAGGTGGCTAATAATAATAATAATAAGCCAATATTCTTTGATTTTATGAGGCTATATGACTCGCCAATATCTTCTTCTTCATCTTCATCTTCTTCTTGTTTAAGTTCTGATTTCATAACTCAAATGTAA 723 0.3444 MMSKKMRFVKKNKNGVRLLPPGFRFQPTEEELLFQYLKCKVFSFQLPASIIPEINVCNYDPWDLPGNNNNYGEEEERYLFSSKEVKYRNGNRMNRITKSGYWKATGSDKRIISTSSNNNNNNNIVGIRKTLVFYHGKSPNGSRTHWIMREYRLVTTPSNSSQYVEDLGNWVLCRIFKKKRSIESQHHMVKNKINNNVVEVANNNNNKPIFFDFMRLYDSPISSSSSSSSSCLSSDFITQM* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g2680 240 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 6 237 - -
Ahy8g2680 240 Gene3D NAC domain 28 183 IPR036093 GO:0003677|GO:0006355
Ahy8g2680 240 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 6 237 - -
Ahy8g2680 240 ProSiteProfiles NAC domain profile. 19 178 IPR003441 GO:0003677|GO:0006355
Ahy8g2680 240 SUPERFAMILY NAC domain 17 178 IPR036093 GO:0003677|GO:0006355
Ahy8g2680 240 MobiDBLite consensus disorder prediction 221 240 - -
Ahy8g2680 240 Pfam No apical meristem (NAM) protein 20 153 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g2680 Ahy-Chr8 50199899 50201903 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g2680 9 215 NAC Transcription Factor Family AT5G13180 53.636 1.36e-69 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Ahy8g2680 NAM 1.10E-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g2680 - - aprc:113868555 274.633