Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g2674 ATGATGGCTGCTTTTTCTTCATACCAATATCACCCTAATTTTCTTCCTCTTGACTCTACATTCTTCCAAAACCTAAACACAACAACAACAACTAGTGTTCCTATTCCCCAATCAATTCTTCATCATCATCAAGAAGAAGGGTTCTCTGATTTCAATAATAATACTATAAGCTGTGTTGATCAAATAAGCTCTTGCAACAAGGTTTCATTCATAAGTAATAGTGACAATGAGCCTTCAAATGTTTCTGTCACTACAAGAAACAACCTTAGTCCTCAATCTTCCATGGTAGTTGATAAGCTTGAAATTGGTGAACAAGTTACTCAAAAGGTCACTACTATGGAGAGGAAGAGAAGAACTAGACATGGATCTTCTCCCATCACTACTAATCCCCAATCTAAGGATGGAACAACAAGGAAGAGAATGAGGAAGAGCAATAATAATAATGGCGGTGGTGTGGTGAAGAATAAAGAAGATGAGAAAGCAAAAGATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATGGTAGTAATGAAGAAGAGGAGCCACCAAAAGGGTATATCCACGTCAGAGCAAGAAGGGGTCAAGCTACTGATAGCCACAGCCTTGCTGAAAGGGTGAGAAGAGAGAAAATAAGTGAAAGGATGAAGATGTTGCAGCGGCTTGTGCCAGGCTGTGATAAGGTGACTGGGAAGGCCCTTATGTTGGATGAAATAATCAATTATGTTCAATCTTTACAGAATCAAGTAGAGTTCTTGTCTTTGAAGCTTGCTTCGGTGAGTCCCATTTTCTATGACATGGCAACAGATCTAAACACTACTCTCTTGGTTAGACCTGAGAAATTAAACATCCAAAATTGCAGCAGCTCTAACATCCAACAAACCACCAAAACCAGCACCCTACCTGCCGCCGTTGCCGCCGCCACCACCGCCACCGTCTTCCCCACCGCTAATGATCACTATCTCTTGGATAGTAATTCAGCTTCAGTTTTTCTTCAAGCCCAGAAATCAAATGTCTTCTCCATGGAGAACGGTAGTCAATTCTGGGACACAGAAGAGCAAAGACAAAAATTTCTTCATCCATATGAATTCATCAACAACAACAACTTATGTTCCTTTCATTAG 1137 0.3879 MMAAFSSYQYHPNFLPLDSTFFQNLNTTTTTSVPIPQSILHHHQEEGFSDFNNNTISCVDQISSCNKVSFISNSDNEPSNVSVTTRNNLSPQSSMVVDKLEIGEQVTQKVTTMERKRRTRHGSSPITTNPQSKDGTTRKRMRKSNNNNGGGVVKNKEDEKAKDNNNNNNNNNNNNNNNNGSNEEEEPPKGYIHVRARRGQATDSHSLAERVRREKISERMKMLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSLKLASVSPIFYDMATDLNTTLLVRPEKLNIQNCSSSNIQQTTKTSTLPAAVAAATTATVFPTANDHYLLDSNSASVFLQAQKSNVFSMENGSQFWDTEEQRQKFLHPYEFINNNNLCSFH* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g2674 378 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 200 250 IPR011598 GO:0046983
Ahy8g2674 378 MobiDBLite consensus disorder prediction 165 184 - -
Ahy8g2674 378 CDD bHLH_AtBPE_like 190 275 - -
Ahy8g2674 378 Pfam Helix-loop-helix DNA-binding domain 204 251 IPR011598 GO:0046983
Ahy8g2674 378 Gene3D - 197 265 IPR036638 GO:0046983
Ahy8g2674 378 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 198 264 IPR036638 GO:0046983
Ahy8g2674 378 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 2 378 IPR024097 GO:0006355
Ahy8g2674 378 PANTHER BASIC HELIX LOOP HELIX PROTEIN BHLH8 2 378 - -
Ahy8g2674 378 Coils Coil 153 173 - -
Ahy8g2674 378 SMART finulus 206 256 IPR011598 GO:0046983
Ahy8g2674 378 MobiDBLite consensus disorder prediction 107 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g2674 Ahy-Chr8 50118689 50122127 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g2674 121 344 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50915 48.214 1.32e-54 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy8g2674 HLH 2.40E-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g2674 - - ahf:112708119 681.404