Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g2667 ATGATGTCGTCGTCTTGGGCATCAATGGAAGCTGAGACAGAACACCAACAACAAACCCACAACGACCATGATTTCACTTCCTTATGTTCTTTCAACAATAACTTGCCTTTCATGGAGGTTGATGATGTCAATGACATCATGATGATGATGACGATGATGAGAGACATGTCTAACTTCTTCCCTGAACCAGACACCACCAACAACAACAACCTCGTACTCCTTCATCATCACTCATCATCATCTTCTTCTTCTTCTTCTTCGTCATCACACCTTCAATGCTTTCTCCCTCCTCCTCCTCCACCAAACCCATTTGACATGCCTACCATGGCTTCCTTCCTTGACCCTCATCAAGCTTCCATAACCGCCACTACTGATTTTGGAGGTTTTCATCATCACAACTTGGAGGAACTAGGTTCTTGTTCTTCTTCTGGAAAACCCGCACCACCACCACCACCACCATTGTTCTTCAACAGATCCAAGATTTTGAGACCCCTTGATGATTCTCTACCTCCATCTGGAGCACAACCAACTCTGTTTCAGAAGAGAGCAGCACTCAGAAAAAACAACTCCTCATCACAACAACAACAAGGTGGTGTTCTTGGAGAAGATGATAACAATAAGAATAGTATGAAGAGAAAGGTGGTGATGGAGATGGAAGATAACGGAAGCTTTGATGGGTCATCGGCATTCAACTATGATTCCGGCGATGACTTGATTGAAACCAATAACAAGAAGAATAATCAGAAAGGAGGTGGTGGCAAGAATAAGAAAGGGATGCCGGCGAAGAACTTGATGGCGGAGCGGCGTCGCCGGAAGAAGCTCAATGATAGGCTCTACATGCTCAGGTCCGTTGTTCCAAAGATTAGCAAAATGGACAGGGCTTCAATATTAGGAGATGCAATTGAATATCTGAGGGAACTGCTGCAGAGAATCAATGAGCTTCATAATGAATTGGAATCATCATCATCAACTTCAACTAATTCTGGAAGTGGTTCAGTCATGACAGCAGTACCAACAGTAGTAGCCTCATCAAGCTTCTATCCATTGACACCAACTCCACCATCACTCCCAACCCGCATTAAAGAAGAGATTTGCCCCACTTCACTTCCTAGTCCCAATGCTCAACCTCCTAGGGTTGAGGTGAGGTTGAGAGAAGGAAGGGCAGTGAACATTCACATGTTTTGTGGTCGGAAAGCAGGGCTTCTGCTGTCAACAATGAGGGCATTGGACACACTTGGCTTAGACATTCAGCAAGCTGTTATCAGCTGTTTCAATGGTTTTGCTTTGGATATTTTCAGAGCTGAGCAATGCAAAGAAGGTCAAGATGTGCATCCAGAGCAAATCAAGGCAGTGCTCTTGGATACAGCTGGGTACCCTGCCATCATCTAA 1389 0.4471 MMSSSWASMEAETEHQQQTHNDHDFTSLCSFNNNLPFMEVDDVNDIMMMMTMMRDMSNFFPEPDTTNNNNLVLLHHHSSSSSSSSSSSSHLQCFLPPPPPPNPFDMPTMASFLDPHQASITATTDFGGFHHHNLEELGSCSSSGKPAPPPPPPLFFNRSKILRPLDDSLPPSGAQPTLFQKRAALRKNNSSSQQQQGGVLGEDDNNKNSMKRKVVMEMEDNGSFDGSSAFNYDSGDDLIETNNKKNNQKGGGGKNKKGMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLRELLQRINELHNELESSSSTSTNSGSGSVMTAVPTVVASSSFYPLTPTPPSLPTRIKEEICPTSLPSPNAQPPRVEVRLREGRAVNIHMFCGRKAGLLLSTMRALDTLGLDIQQAVISCFNGFALDIFRAEQCKEGQDVHPEQIKAVLLDTAGYPAII* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g2667 462 MobiDBLite consensus disorder prediction 76 92 - -
Ahy8g2667 462 MobiDBLite consensus disorder prediction 76 102 - -
Ahy8g2667 462 CDD ACT_UUR-ACR-like 391 451 - -
Ahy8g2667 462 MobiDBLite consensus disorder prediction 235 262 - -
Ahy8g2667 462 Pfam Helix-loop-helix DNA-binding domain 265 307 IPR011598 GO:0046983
Ahy8g2667 462 Gene3D - 254 323 IPR036638 GO:0046983
Ahy8g2667 462 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 258 307 IPR011598 GO:0046983
Ahy8g2667 462 Coils Coil 297 324 - -
Ahy8g2667 462 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 75 459 - -
Ahy8g2667 462 MobiDBLite consensus disorder prediction 184 208 - -
Ahy8g2667 462 MobiDBLite consensus disorder prediction 184 203 - -
Ahy8g2667 462 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 261 320 IPR036638 GO:0046983
Ahy8g2667 462 MobiDBLite consensus disorder prediction 1 21 - -
Ahy8g2667 462 SMART finulus 264 313 IPR011598 GO:0046983
Ahy8g2667 462 PANTHER BHLH TRANSCRIPTIONAL FACTOR 75 459 - -
Ahy8g2667 462 MobiDBLite consensus disorder prediction 137 158 - -
Ahy8g2667 462 CDD bHLH_AtAMS_like 261 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g2667 Ahy-Chr8 50007980 50012753 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g2667 157 435 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 62.456 3.07e-99 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy8g2667 HLH 3.20E-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g2667 - - gmx:100217332 389.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g2912 18 133991325 133996550 Ahy8g2667 8 50007980 50012753 hybridization
Ahy13g2938 13 118548949 118554133 Ahy8g2667 8 50007980 50012753 PCT
Ahy3g2599 3 116242220 116246511 Ahy8g2667 8 50007980 50012753 PCT
Ahy8g2667 8 50007980 50012753 Ahy13g2938 13 118548949 118554133 PCT
Ahy8g2667 8 50007980 50012753 Ahy3g2599 3 116242220 116246511 PCT