Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g2665 ATGTTATCTCCTAGATTAGTGCTCTTCACAATTTTGGAGGCTGTCACTGGAGTAATGGATGCTAATCTTCAATATTTTCGACAGGGATATGAACTACTACATCAGTTGGAGCCCTTCATTGTTGAGGTTTTGTCATATGTACAAAAAGCAAGGGAAAGTCACAATGAGGAGCAGGTTTCTCTATTTGAAAGAATGATAGAGTACAAGCAACTTGTTCATCAAGAAAGTAAGTTGTCCTTGAAGGGATTTTATGATTCTCCTGGTCGAGACTCTCCATTTTCTAGGATATCAAGTGATGTGTTAGATGCAGTAACAGAATCTGGTGCCAACTCGCAGAAGAGTCATCATACCTTTGATAATTCTTCTGGCATTTTGAGTCGGTTGATATCTTCACATATTCATGGAGCCAATGATGAAAAGCCCGTTGCTCGTCATACGGTGAACTTGCTTACATCAACAATCAAGGTTGATGCGGAACAGACAGATTTAAGATTCTGCTTTAGGATTGTTTCTCCTTCAAAGGTTTATACATTGCAGGCAGAAAATGCCCTGGACCAAAGGGATTGGATGGAAAAGATAACCGGAGTAATTGCATCCTTGCTCACTATACACACACTGGGAAAGCCTCAGCCTGTAATTTCTCGCTCAGAAGGTGGTGACTGGGATTCTGCCAGCCCAACTGATTCAGTACAAAGTTCTTCTGATGAGGAAATGGCAGTAAATTCAGGTTTGGCATGCAAGATCACCCCCAAGTCAAATAGGTCACCTAGTGGCTTGCAGAAGCATAAACACAGTATAAAATGTGAAAAGCCAATCGATGTTCTTCGAAGGGTTAATGGGAATGACAAATGTGCTGATTGTGGTAAATCTGAACCAGACTGGGTATCCTTAAACCTTGGCATCCTTGTATGCATTGAATGTTCTGGTGTTCATCGAAATCTTGGTGTACATATATCCAAAGTAAGATCACTGACACTTGATGTGAAAGTATGGGATTCCTCAGTTTTAAGCATGTTTCAATCACTTGGCAATCTCTTTGCAAACTCAGTTTGGGAGGAGTTATTGCATTCGAAAACTTCAACAGATGATACTCTTGATGGATCATCCAAGGGCACCAGAACCAAATTATTTCATGCAAGAAAACCTGCATATGATGATCCCATTTCACTAAAGGAGAGGTTCATCCATGCAAAGGGGGGCCAATACACATGTAGTAGATAA 1221 0.407 MLSPRLVLFTILEAVTGVMDANLQYFRQGYELLHQLEPFIVEVLSYVQKARESHNEEQVSLFERMIEYKQLVHQESKLSLKGFYDSPGRDSPFSRISSDVLDAVTESGANSQKSHHTFDNSSGILSRLISSHIHGANDEKPVARHTVNLLTSTIKVDAEQTDLRFCFRIVSPSKVYTLQAENALDQRDWMEKITGVIASLLTIHTLGKPQPVISRSEGGDWDSASPTDSVQSSSDEEMAVNSGLACKITPKSNRSPSGLQKHKHSIKCEKPIDVLRRVNGNDKCADCGKSEPDWVSLNLGILVCIECSGVHRNLGVHISKVRSLTLDVKVWDSSVLSMFQSLGNLFANSVWEELLHSKTSTDDTLDGSSKGTRTKLFHARKPAYDDPISLKERFIHAKGGQYTCSR* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g2665 406 SUPERFAMILY PH domain-like 128 201 - -
Ahy8g2665 406 Pfam Putative GTPase activating protein for Arf 272 366 IPR001164 GO:0005096
Ahy8g2665 406 PANTHER CENTAURIN/ARF 9 111 IPR045258 GO:0005096
Ahy8g2665 406 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD1 9 111 - -
Ahy8g2665 406 SMART arf_gap_3 269 392 IPR001164 GO:0005096
Ahy8g2665 406 PANTHER CENTAURIN/ARF 115 398 IPR045258 GO:0005096
Ahy8g2665 406 Gene3D Arf GTPase activating protein 251 403 IPR038508 -
Ahy8g2665 406 ProSiteProfiles ARF GTPase-activating proteins domain profile. 269 352 IPR001164 GO:0005096
Ahy8g2665 406 MobiDBLite consensus disorder prediction 212 234 - -
Ahy8g2665 406 Gene3D Arfaptin homology (AH) domain/BAR domain 7 75 IPR027267 -
Ahy8g2665 406 SMART PH_update 72 200 IPR001849 -
Ahy8g2665 406 CDD ArfGap 272 398 - -
Ahy8g2665 406 PRINTS HIV Rev interacting protein signature 300 317 IPR001164 GO:0005096
Ahy8g2665 406 PRINTS HIV Rev interacting protein signature 323 344 IPR001164 GO:0005096
Ahy8g2665 406 PRINTS HIV Rev interacting protein signature 281 300 IPR001164 GO:0005096
Ahy8g2665 406 Pfam PH domain 141 197 IPR001849 -
Ahy8g2665 406 SUPERFAMILY BAR/IMD domain-like 9 65 IPR027267 -
Ahy8g2665 406 MobiDBLite consensus disorder prediction 220 234 - -
Ahy8g2665 406 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD1 115 398 - -
Ahy8g2665 406 SUPERFAMILY ArfGap/RecO-like zinc finger 269 358 IPR037278 -
Ahy8g2665 406 Gene3D - 109 204 IPR011993 -
Ahy8g2665 406 ProSiteProfiles PH domain profile. 164 198 IPR001849 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g2665 Ahy-Chr8 49949937 49955733 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g2665 281 378 C2H2 Transcription Factor Family AT4G21160 45.098 3.99e-19 85.9