Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g2661 ATGGAAGAAGGTGCAGAATCGTTACGCGCCAGATGCTGGAGATTCTACAAAGGGTGTAAAAAGTACACGGATGGGCTTTTAGATGCATGTGATGGAGACTTCACCTTTGCAAGTGCCCTCGAAAATTTTGGGGGAGAACATTCTGATCCTTTATTTGTAACTTTGGGAGGGCCTGTTATGACCAAATTCTCTATGGCTTTGAGAGACATCAGTACATTCAAGGACGCTCTTAGGACACAGGAAGCTCGAAAGCGTTTTGACAAGGCTTCCATTGCATATGACCAGGCACGGGAGAAGTTTATGTCATTGAGGAAAAGTACTAGGCAGGATATCGTCATTGCAATAGAGGAGGAATTGCACAATGCAAGAAGCTCATTTGAAGAAGCCCGTTTCAATCTGATTAGTGCTCTTCACAATGTCGAGGCCAAAAAAAGATTCGAGTTTTTGGAGGCTGTCACTGGAGTAATGGATGCTCATCTTCAATATTTTCGACAGGGATATGAACTACTACATCAGTTGGAGCCCTTCATTGTTGAGGTTTTGTCATATGTACAAAAAGCAAGGGAAAGTCACAATGAGGAGCAGGTTTCTCTATTTGAAAGAATGATAGAGTACAAGCAACTTGTCCATCAAGAAAGTAAGTTGTCCTTGAAGGGATTTTATGATTCTCCTGGTCGAGACTCTCCATTTTCTAGGATATCAAGTGATGTGTTAGATGCAGTAACAGAATCTGTCAAAACCGGAAAGGTTCAAACCATTCGAGAAGGGTTTCTCTCAAAACGATCCAGCAATTTAAGAGGCGATTGGAAGAGAAGGTATTTTGTTCTTGATAGTCGCGGAATGCTTTACTACTTTCGCAAACCATTGACTCTCTTCCATGGTGCCAACTCGCAGAAGAGTCATCATACCTTTGATAATTCTTCTGGCATTTTGAGTCGGTTGATATCTTCACATATTCATGGAGCCAATGATGAAAAGCCTGTTGCTCGTCATACGGTGAACTTGCTTACATCAACAATCAAGGTTGATGCCGAACAGACAGATTTAAGATTCTGCTTTAGGATTGTTTCTCCTTCAAAGGTTTATACATTGCAGGCAGAAAATGCCCTGGACCAAAGGGATTGGATGGAAAAGATAACCGGAGTAATTGCATCCTTGCTCACTATACACACGCTGGGAAAGCCTCAGCCTGTAATTTCTCTCTCAGAAGGTGGTGACTGGGATTCTGCCAGCCCAACTGATTCAGTACAAAGTTCTTCTGATGAGGAAATGGCAGTAAATTCAGGTTTGGCATGCAAGATCACCCCCAAGTCAAATAGGTCACCTAATGGCTTGCAGAAGCATAAACACAGTATAAAATGTGAAAAGCCAATCGATGTTCTTCGAAGGGTTAATGGGAATGACAAATGTGCTGATTGTGGTAAATCTGAACCAGACTGGGCATCCTTAAACCTTGGCATCCTTGTATGCATTGAATGTTCTGGTGTTCATCGAAATCTTGGTGTACATATATCCAAAGTAAGATCACTGACACTTGATGTGAAAGTATGGGATTCCTCAGTTTTAAGCATGTTTCAATCACTTGGCAATCTCTTTGCAAACTCAGTTTGGGAGGAGTTATTGCATTCGAAAACTTCAACAGATGATACTCTTGATGGATCATCTAAGGGCACCAGAACCAAATTATTTCATGCAAGAAAACCTGCATATGATGATCCCATTTCACTAAAGGAGAGGTTCATCCATGCAAAGTATTCTGAGAAAGTCTTTGTTCGCCGGATACCAAACAACAATCGTCTCCGTACAGTGGCACAACTGGTCTGGGAAAGCATCTTTGCCAATGACAAGAAATCAGTGTACCGGCATATTGTGAGATCCAGTGTGGATATCAATGCTTTAAATTTAAATGGTCAATTTGATGGAAATTCTTTTGCCACGCCTTCTTCAAGTCACTCAAGCATGTCATCTGAAACTGAAATCCAACTAATGGAGGACATAAAAGATGGCTCAAGTGTGCTTCACTTGGCATGCCTTGTATCTGACGCTGGAATGGTGGAGCTGCTCCTACAGTATGGTGCAGATATAAATGCAGTTGATTCAATTGGTCGAACACCATTACATTACTGCATGTTTAGAGGGAAGATTGCAACTGCAAAATTACTTATTTTAAGGGGGGCCAATACACATGTAGTAGATAAACAAGGCAAGACTCCTCTCATGCTTGCATCAGAACCTAGCAGTGAAATTGTTGGTCTGATATCAAGCAGATGA 2271 0.4157 MEEGAESLRARCWRFYKGCKKYTDGLLDACDGDFTFASALENFGGEHSDPLFVTLGGPVMTKFSMALRDISTFKDALRTQEARKRFDKASIAYDQAREKFMSLRKSTRQDIVIAIEEELHNARSSFEEARFNLISALHNVEAKKRFEFLEAVTGVMDAHLQYFRQGYELLHQLEPFIVEVLSYVQKARESHNEEQVSLFERMIEYKQLVHQESKLSLKGFYDSPGRDSPFSRISSDVLDAVTESVKTGKVQTIREGFLSKRSSNLRGDWKRRYFVLDSRGMLYYFRKPLTLFHGANSQKSHHTFDNSSGILSRLISSHIHGANDEKPVARHTVNLLTSTIKVDAEQTDLRFCFRIVSPSKVYTLQAENALDQRDWMEKITGVIASLLTIHTLGKPQPVISLSEGGDWDSASPTDSVQSSSDEEMAVNSGLACKITPKSNRSPNGLQKHKHSIKCEKPIDVLRRVNGNDKCADCGKSEPDWASLNLGILVCIECSGVHRNLGVHISKVRSLTLDVKVWDSSVLSMFQSLGNLFANSVWEELLHSKTSTDDTLDGSSKGTRTKLFHARKPAYDDPISLKERFIHAKYSEKVFVRRIPNNNRLRTVAQLVWESIFANDKKSVYRHIVRSSVDINALNLNGQFDGNSFATPSSSHSSMSSETEIQLMEDIKDGSSVLHLACLVSDAGMVELLLQYGADINAVDSIGRTPLHYCMFRGKIATAKLLILRGANTHVVDKQGKTPLMLASEPSSEIVGLISSR* 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g2661 756 ProSiteProfiles PH domain profile. 251 384 IPR001849 -
Ahy8g2661 756 ProSiteProfiles Ankyrin repeat profile. 668 700 IPR002110 GO:0005515
Ahy8g2661 756 Gene3D Arfaptin homology (AH) domain/BAR domain 1 79 IPR027267 -
Ahy8g2661 756 Gene3D Arfaptin homology (AH) domain/BAR domain 80 211 IPR027267 -
Ahy8g2661 756 Pfam Ankyrin repeats (3 copies) 673 750 IPR002110 GO:0005515
Ahy8g2661 756 CDD PH_ACAP 254 388 - -
Ahy8g2661 756 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD1 1 748 - -
Ahy8g2661 756 Pfam PH domain 253 383 IPR001849 -
Ahy8g2661 756 SUPERFAMILY ArfGap/RecO-like zinc finger 455 593 IPR037278 -
Ahy8g2661 756 Gene3D Arf GTPase activating protein 437 598 IPR038508 -
Ahy8g2661 756 PRINTS HIV Rev interacting protein signature 467 486 IPR001164 GO:0005096
Ahy8g2661 756 PRINTS HIV Rev interacting protein signature 486 503 IPR001164 GO:0005096
Ahy8g2661 756 PRINTS HIV Rev interacting protein signature 509 530 IPR001164 GO:0005096
Ahy8g2661 756 ProSiteProfiles Ankyrin repeat profile. 701 733 IPR002110 GO:0005515
Ahy8g2661 756 Gene3D - 243 391 IPR011993 -
Ahy8g2661 756 SUPERFAMILY PH domain-like 164 383 - -
Ahy8g2661 756 Pfam BAR domain of APPL family 78 195 - -
Ahy8g2661 756 SMART ANK_2a 668 697 IPR002110 GO:0005515
Ahy8g2661 756 SMART ANK_2a 701 730 IPR002110 GO:0005515
Ahy8g2661 756 SMART arf_gap_3 455 598 IPR001164 GO:0005096
Ahy8g2661 756 SUPERFAMILY Ankyrin repeat 667 744 IPR036770 -
Ahy8g2661 756 CDD ArfGap 458 585 - -
Ahy8g2661 756 ProSiteProfiles Ankyrin repeat region circular profile. 701 733 - -
Ahy8g2661 756 PANTHER CENTAURIN/ARF 1 748 IPR045258 GO:0005096
Ahy8g2661 756 SMART PH_update 252 386 IPR001849 -
Ahy8g2661 756 CDD BAR_SFC_plant 1 176 IPR035670 -
Ahy8g2661 756 SUPERFAMILY BAR/IMD domain-like 2 274 IPR027267 -
Ahy8g2661 756 Gene3D - 640 756 IPR036770 -
Ahy8g2661 756 Pfam Putative GTPase activating protein for Arf 458 592 IPR001164 GO:0005096
Ahy8g2661 756 ProSiteProfiles ARF GTPase-activating proteins domain profile. 455 598 IPR001164 GO:0005096
Ahy8g2661 756 SMART 5bar 1 179 IPR004148 GO:0005515|GO:0005737
Ahy8g2661 756 ProSiteProfiles Ankyrin repeat region circular profile. 668 699 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g2661 Ahy-Chr8 49906249 49916050 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g2661 467 592 C2H2 Transcription Factor Family AT4G05330 41.732 7.90e-21 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g2661 K12489 - gmx:100797073 980.319