Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g2650 ATGTCGGCTATGGTTTCTGTCCTCACACAAGTCATGGGAGGAGGCATCCCAAATGACCCTTTAACCCCTTCTCATCAATCTACTAATCACAATAATCAACAATCTCAACCACCATCACAAGATCAAGGGAACATAAGAAGAAGACATTATAGAGGGGTGAGACAACGGCCATGGGGAAAATGGGCGGCGGAGATTCGAGATCCACAAAAGGCAGCTAGGGTATGGCTTGGAACTTTTGAAACTGCTGAGGCGGCTGCGCTCGCATACGACGAGGCAGCCCTTAGATTCAAAGGAAGCAAAGCTAAACTTAATTTTTCTGAAAGAGTTCAAGGAACTGTCGAATTTGGTAATTACCTCACGAATTTTCAACAAAATAATAGTCAACATCAAATTCAACATCAGAATACAGCAACTCAACAAAATGTTCAATATCCATCACAAGGGATAATGACAAATAGTGGCGGATTCGGTTATGATCAACAGAACATGTATTTTATTCCGTCTCATCATCAACACTATTCATCATCATCTTCTTCTTCGTCTTCCGAACTACCACATCAACATTATAACCAACAACAAGAACTTATGAGATCATATTCATTGCAATATGGAGGTTCTTCTTCTTCTAGTGATCATCATTATCATCATCAGCAATATCCTACTAAGAATTGGAATGATGATGACATGGATGGTAGACAATAA 702 0.3974 MSAMVSVLTQVMGGGIPNDPLTPSHQSTNHNNQQSQPPSQDQGNIRRRHYRGVRQRPWGKWAAEIRDPQKAARVWLGTFETAEAAALAYDEAALRFKGSKAKLNFSERVQGTVEFGNYLTNFQQNNSQHQIQHQNTATQQNVQYPSQGIMTNSGGFGYDQQNMYFIPSHHQHYSSSSSSSSSELPHQHYNQQQELMRSYSLQYGGSSSSSDHHYHHQQYPTKNWNDDDMDGRQ* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g2650 233 MobiDBLite consensus disorder prediction 170 214 - -
Ahy8g2650 233 PANTHER DNA-BINDING DOMAIN 24 221 IPR044808 GO:0003700|GO:0009873
Ahy8g2650 233 SMART rav1_2 49 112 IPR001471 GO:0003700|GO:0006355
Ahy8g2650 233 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF110 24 221 - -
Ahy8g2650 233 MobiDBLite consensus disorder prediction 12 45 - -
Ahy8g2650 233 PRINTS Ethylene responsive element binding protein signature 72 88 IPR001471 GO:0003700|GO:0006355
Ahy8g2650 233 PRINTS Ethylene responsive element binding protein signature 50 61 IPR001471 GO:0003700|GO:0006355
Ahy8g2650 233 ProSiteProfiles AP2/ERF domain profile. 49 106 IPR001471 GO:0003700|GO:0006355
Ahy8g2650 233 SUPERFAMILY DNA-binding domain 49 107 IPR016177 GO:0003677
Ahy8g2650 233 Pfam AP2 domain 49 98 IPR001471 GO:0003700|GO:0006355
Ahy8g2650 233 MobiDBLite consensus disorder prediction 170 233 - -
Ahy8g2650 233 CDD AP2 49 105 IPR001471 GO:0003700|GO:0006355
Ahy8g2650 233 MobiDBLite consensus disorder prediction 215 233 - -
Ahy8g2650 233 Gene3D AP2/ERF domain 48 108 IPR036955 GO:0003700|GO:0006355
Ahy8g2650 233 MobiDBLite consensus disorder prediction 20 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g2650 Ahy-Chr8 49740303 49742806 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g2650 1 110 AP2-EREBP Transcription Factor Family AT5G61890 68.644 6.23e-49 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Ahy8g2650 AP2 1.80E-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g2650 - - ahf:112708095 387.497