Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g2618 ATGGAGCTACAAACAACGGCCACCACCACCGCCACCACTTCAACCGTAACCGCCGCGGCAAAATCCACCATAAACCGCGTAGGAGGAACGCGCCACCCTGTCTACCGCGGCGTGAGGAAGCGTCGATGGGGGAAATGGGTTTCGGAGATTCGAGAACCTCGCAAGAAGTCTCGCATATGGCTCGGTTCCTTCCCGTCGCCGGAGATGGCGGCGAAAGCCTACGACGTCGCCGCTTACTTCCTCAAAGGCCGAAAAGCGCAGCTCAATTTTCCCGACGAGGTTCACCGTCTTCCGCCGCTTCCTCCTCCGTCGTCATGCACCGCACGTGACATCCAAGCCGCAGCTGCAAAAGCAGCACACATGGCCGCCGCCGCCGCAGCAGCAGCCGTGACTGCCGATGACGCCGGCGATTCGCCGGAGAAGTGCGGCATTTCGAATTCTTCCTCCGACGGCGATGATTTCTGGGGAGAAATTGAGCTGCCTGAGCTCATGAACGATGGAGAGTGCAGATGGAGTTATTCTCACGGCGGCGGTGGGTGGAACTCCGGCGGATCCTCCGGCTCCGGCGACGTAACGGCTTGGCCGGAAGTTGAGTTACCGTATAGTGGTTAG 612 0.6013 MELQTTATTTATTSTVTAAAKSTINRVGGTRHPVYRGVRKRRWGKWVSEIREPRKKSRIWLGSFPSPEMAAKAYDVAAYFLKGRKAQLNFPDEVHRLPPLPPPSSCTARDIQAAAAKAAHMAAAAAAAAVTADDAGDSPEKCGISNSSSDGDDFWGEIELPELMNDGECRWSYSHGGGGWNSGGSSGSGDVTAWPEVELPYSG* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g2618 203 PRINTS Ethylene responsive element binding protein signature 35 46 IPR001471 GO:0003700|GO:0006355
Ahy8g2618 203 PRINTS Ethylene responsive element binding protein signature 73 93 IPR001471 GO:0003700|GO:0006355
Ahy8g2618 203 SMART rav1_2 34 97 IPR001471 GO:0003700|GO:0006355
Ahy8g2618 203 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 5 200 - -
Ahy8g2618 203 Pfam AP2 domain 33 83 IPR001471 GO:0003700|GO:0006355
Ahy8g2618 203 Gene3D AP2/ERF domain 34 92 IPR036955 GO:0003700|GO:0006355
Ahy8g2618 203 ProSiteProfiles AP2/ERF domain profile. 34 91 IPR001471 GO:0003700|GO:0006355
Ahy8g2618 203 SUPERFAMILY DNA-binding domain 34 93 IPR016177 GO:0003677
Ahy8g2618 203 CDD AP2 35 92 IPR001471 GO:0003700|GO:0006355
Ahy8g2618 203 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 5 200 - -
Ahy8g2618 203 MobiDBLite consensus disorder prediction 177 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g2618 Ahy-Chr8 49349837 49350669 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g2618 30 181 AP2-EREBP Transcription Factor Family AT1G01250 63.816 6.00e-51 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Ahy8g2618 AP2 5.60E-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g2618 K09286 - gmx:100802845 206.068