Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g2554 ATGAGTGAAGAAGAATTTGATCCTTTCTCAATTATGAAACTGTTGGAGGTGCCTCTTCCGGACGCAGAGCTGTTTGCCGCAGACGTGGGACCATCTCAGTTTCAGTCGCCCTCATCCTCCAATGTGCCTCTTCCGGAGTTTCCAATTGGCAATCAACAGCCTCAGCCTCTGCCTCCTCTGCCTCTGCCTCTGTCTCTGCCTCAGCCTCAGCCTCTGCCTCCTCTGCCTCTGCCGGAGTTTGCAGCCAATGTGCCTCTGTGGCACTTTCCCGCCAATGTGTCTCAGCCGCAGTTTGCCGTTGACCTGTGTGGCTATCAACAACCTCAGGCACAGCCTGAGACAGTATGGAGTGGGGATGAGAACAAAGAGTTCGACATGGGAGCACCTCAGTTTCAGTGGCCCTCTGAGTTTCAGTCTCTGCCTCTGCATCATCCGGTCTGGACTGGGGACGAAAACCATAATCTTGCCGCCAATGTCGGTGGTAATCAACAGCCTCAGCCTCAGCTTCCGCTTCCATCGCAGCTTGCCACCGATGTGCCTCTGCTGCAGTTTGCCGCCAATGTCGGTGGTAACCAACCGCCTCAGTTGCAGCTTCCGCCTCTGCATGAGTTTCCCGCTGACGTGTGTGGCTATCAACAACCTCAGGCACAGCCTGAGCCCGTCTGGAGTGAGGATGAGAACAAACAGTTTGAAATAATTATTGCTGAATGTCTTCCGGAAGAAATGCAGAACCGGTGGGAGGCTGTGGCTGCTTGTCTCCCCGGGAAGACCCCCGAGCAGATACAGGAACGCTTCCAGGAGCTCCTCACCGACATCAATCTCATCCATAAATCTTATATCAATCTGCATCACACCTCCATCGCACCTGCTGCACCTCCCACCACATTGGAACGCAATCCACTCTCCCTCCCCGGAACAATTGAACAAAACCAACCTGCCAACACCAACATAATCGAACACCAACCTTTAACTAAGACTACTGAAAGAAAGAAAACAGTTCATTGGACTCAACAAGAGAAAGAGTTATTTCTTAGGGGATATAAAGAATTAGGACGTAATTGGAAAAGAATTTCGGAAGATTATGTCAAAACAAGAACGAAAGAACAAGTTGCTAGCCATGCACAAAAAGTTCTAAAAAAATTAGCTGAAAAAATAGAAGAAATAACATTTGTGATGAATGATAGTAAGTTATCTTCTCATTCTTAA 1206 0.49 MSEEEFDPFSIMKLLEVPLPDAELFAADVGPSQFQSPSSSNVPLPEFPIGNQQPQPLPPLPLPLSLPQPQPLPPLPLPEFAANVPLWHFPANVSQPQFAVDLCGYQQPQAQPETVWSGDENKEFDMGAPQFQWPSEFQSLPLHHPVWTGDENHNLAANVGGNQQPQPQLPLPSQLATDVPLLQFAANVGGNQPPQLQLPPLHEFPADVCGYQQPQAQPEPVWSEDENKQFEIIIAECLPEEMQNRWEAVAACLPGKTPEQIQERFQELLTDINLIHKSYINLHHTSIAPAAPPTTLERNPLSLPGTIEQNQPANTNIIEHQPLTKTTERKKTVHWTQQEKELFLRGYKELGRNWKRISEDYVKTRTKEQVASHAQKVLKKLAEKIEEITFVMNDSKLSSHS* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g2554 401 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 327 382 IPR017930 -
Ahy8g2554 401 Gene3D - 216 281 - -
Ahy8g2554 401 Gene3D - 334 381 - -
Ahy8g2554 401 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 330 377 IPR006447 GO:0003677
Ahy8g2554 401 ProSiteProfiles Myb-like domain profile. 222 269 IPR001005 -
Ahy8g2554 401 MobiDBLite consensus disorder prediction 29 65 - -
Ahy8g2554 401 ProSiteProfiles Myb-like domain profile. 327 378 IPR001005 -
Ahy8g2554 401 CDD SANT 335 378 IPR001005 -
Ahy8g2554 401 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 221 383 IPR043363 -
Ahy8g2554 401 SUPERFAMILY Homeodomain-like 219 270 IPR009057 -
Ahy8g2554 401 Pfam Myb-like DNA-binding domain 221 269 IPR001005 -
Ahy8g2554 401 Pfam Myb-like DNA-binding domain 333 378 IPR001005 -
Ahy8g2554 401 CDD SANT 222 269 IPR001005 -
Ahy8g2554 401 ProSiteProfiles SANT domain profile. 335 384 IPR017884 -
Ahy8g2554 401 SMART sant 218 271 IPR001005 -
Ahy8g2554 401 SMART sant 331 380 IPR001005 -
Ahy8g2554 401 MobiDBLite consensus disorder prediction 49 65 - -
Ahy8g2554 401 MobiDBLite consensus disorder prediction 31 48 - -
Ahy8g2554 401 SUPERFAMILY Homeodomain-like 327 381 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g2554 Ahy-Chr8 48438335 48441137 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy8g2554 Myb_DNA-binding 9.10E-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g2554 - - ahf:112708481 758.059