Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g2547 ATGGCGGGAAAAGTGTCGAAGGCAGCATTCGATGCGAAGATGTGGAAGCTCTTGAAGGAGTACAGCCAGGTGGTGGTGGTTACCTCCGATAACGTTGGTTCCAACCAAATCAATGGCATACGGAGGAGTTTAAAGGGCGACTCCATTGTCGTTATGGGGAAGAACTCCATGATGAGGCGCTCCTTCACGCTTCAAGCTGGAAACAATTCCTTCCTCAACCTTACTCCTCTTCTTAGGGGAAGTGTAGCGTTGATTTTCACCAAAGGAGATATGAAGGAGGTTAGCGACGGGGTTGCTAAGTTGAAGGTTGTTAATCCTCTTCTCATGTGCTCCAAATACTTGTCATATGAATCGTACCGCAATTGTTCTTACATGCAATCTGGACAGTTGCCTTTGGGCCTCAAGTGTTGTAACCAGCAGTTGTTGCAGGATTCTGAACCTTTTTTTGTATGCTCAAAATTCATGCCACACCAGCATTGTTTAATGACGAGATCAAGACAGCTCTTGGCGATGAGTGTATGGTCTCCTCTTCTCCTTTTGGCTGGTCACTTGTGA 555 0.4631 MAGKVSKAAFDAKMWKLLKEYSQVVVVTSDNVGSNQINGIRRSLKGDSIVVMGKNSMMRRSFTLQAGNNSFLNLTPLLRGSVALIFTKGDMKEVSDGVAKLKVVNPLLMCSKYLSYESYRNCSYMQSGQLPLGLKCCNQQLLQDSEPFFVCSKFMPHQHCLMTRSRQLLAMSVWSPLLLLAGHL* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g2547 184 SUPERFAMILY Ribosomal protein L10-like 7 101 IPR043141 -
Ahy8g2547 184 Pfam Ribosomal protein L10 6 99 IPR001790 -
Ahy8g2547 184 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 1 182 - -
Ahy8g2547 184 Gene3D - 4 116 IPR043141 -
Ahy8g2547 184 PANTHER RIBOSOMAL PROTEIN L10P-RELATED 1 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g2547 Ahy-Chr8 48358024 48359904 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g2547 1 106 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 56.637 1.20e-35 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g2547 K02941 - twl:120015003 130.954