Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g2530 ATGGCTTTCACCTATTCTTCTTCATTTAGATCATGCAAGTATCATGTATTTCTGAGTTTCAGAAGTGAAGACACTCGCTATGTATTTCTGAGTTTCAAAAGTGAAGAGTATTTGGATTTGTCCAAACAGGTGATCCAATATTGTGCTGGTCTTCCATTGGCACTTGAGGTGTTGGGTTCCCACCTTTATGATTCCATGGACAAGGATATTTTTTTAGACATTGCTTATTTTTTCAAAGGATGGTTTCAAGATACTGTTATAGCTATGTTAAAAGGGCGTGGTTATCATCTTGAAATTGGTATCGCGACTTTGATTGTTAGATCTCTACTCACTATAAATGAGGAAGGTAGGTTGAAGATACATGATTTGGTCGAAGAAATGGGCAAACATATTATAATTCAGGAATTTCCAAATGATCCTAGCAAGCATAGCATGTTGCAAAATTACGAGGACATCGATATTGTTCTTACTCAAAAGAAGATAAATGGAAAATTTTTCACAGTTATAAAACTAGAAAATTAG 522 0.3467 MAFTYSSSFRSCKYHVFLSFRSEDTRYVFLSFKSEEYLDLSKQVIQYCAGLPLALEVLGSHLYDSMDKDIFLDIAYFFKGWFQDTVIAMLKGRGYHLEIGIATLIVRSLLTINEEGRLKIHDLVEEMGKHIIIQEFPNDPSKHSMLQNYEDIDIVLTQKKINGKFFTVIKLEN* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g2530 173 Gene3D - 22 75 IPR042197 -
Ahy8g2530 173 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 65 158 - -
Ahy8g2530 173 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 65 158 IPR044974 GO:0006952
Ahy8g2530 173 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 74 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g2530 Ahy-Chr8 48135011 48135631 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g2530 39 135 WRKY Transcription Factor Family AT5G45050 32.824 1.99e-14 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g2530 - - ahf:114924368 348.977