Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g2444 ATGAAGACTGAATCTATTCCTAGAAAAAGGAGATCGCGCAGGAGACGCAGTGGAGGAAGTGATTCAGTAGAGAGTACTCTTGAGAAGTGGAAGGAGTACAATAAACAGCAACAACAACTAATCAGTGAAAGAGATGGGGTTGAAATAATTCACAAGGTTCCTAAAGGATCGAAAAGAGGGTGTATGAAAGGCAAAGGTGGACCACAGAATTATGATTGCAAGTTCAGGGGCGTGAGGCAGAGGATTTCGGGCAAATGGGTTGCAGAAATCCGCAAACCTATCAATAGCAAGAGTGTTGGTGAAGAAGCAAACAAGCTTTGGCTTGGAACCTTTTCTACTGCACTTGAAGCTGCTCTTGCTTATGATGAAGCAGCAAGGACCATGTATGGCCCTGGTGCTCGTTTGAACTTCCCTCAGCATCATGGCATAGAATTAGTAGGTTCTAATGGATCATCTATTAGTCCAGTATTTGATCAGAAATCACCAAGTGAAACCGATATAGATACTTTGAATGGTGGTGATGTTGCAAAAGTTGACGGGTTGGAGGGAAATCTTGATATGGGTCTCGAAGAACAACTCAAGTTTTCTGAGGTAAATGAATTATTGGAGATGGAATGTGAGGGAGGAATTCTTCAAGGGCCTTTTAAGTATGTAAAGGACGAAGTTGCTGGAGGAAGTGAAGGATTAGAAGGAGAGTTAGAGGAGGTTTTGAAAAACTCTGGTTTAGTTGAAGAGTGTAATAATTACATGCTAGAGGATTCTATGTGCATGGCTACGAATACAGAAGCTGATTATAACTCTTGTGATGCTACTGAACAGGGGATTATGGGGAAGAGTGAAGTGAAAAATTATAAATCCAAACAGTAA 867 0.4129 MKTESIPRKRRSRRRRSGGSDSVESTLEKWKEYNKQQQQLISERDGVEIIHKVPKGSKRGCMKGKGGPQNYDCKFRGVRQRISGKWVAEIRKPINSKSVGEEANKLWLGTFSTALEAALAYDEAARTMYGPGARLNFPQHHGIELVGSNGSSISPVFDQKSPSETDIDTLNGGDVAKVDGLEGNLDMGLEEQLKFSEVNELLEMECEGGILQGPFKYVKDEVAGGSEGLEGELEEVLKNSGLVEECNNYMLEDSMCMATNTEADYNSCDATEQGIMGKSEVKNYKSKQ* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g2444 288 SUPERFAMILY DNA-binding domain 74 139 IPR016177 GO:0003677
Ahy8g2444 288 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 8 268 - -
Ahy8g2444 288 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 8 268 - -
Ahy8g2444 288 CDD AP2 73 140 IPR001471 GO:0003700|GO:0006355
Ahy8g2444 288 Gene3D AP2/ERF domain 73 140 IPR036955 GO:0003700|GO:0006355
Ahy8g2444 288 ProSiteProfiles AP2/ERF domain profile. 74 138 IPR001471 GO:0003700|GO:0006355
Ahy8g2444 288 SMART rav1_2 74 144 IPR001471 GO:0003700|GO:0006355
Ahy8g2444 288 MobiDBLite consensus disorder prediction 1 16 - -
Ahy8g2444 288 MobiDBLite consensus disorder prediction 1 28 - -
Ahy8g2444 288 Pfam AP2 domain 73 130 IPR001471 GO:0003700|GO:0006355
Ahy8g2444 288 PRINTS Ethylene responsive element binding protein signature 75 86 IPR001471 GO:0003700|GO:0006355
Ahy8g2444 288 PRINTS Ethylene responsive element binding protein signature 104 120 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g2444 Ahy-Chr8 47160052 47162064 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g2444 13 139 AP2-EREBP Transcription Factor Family AT2G40340 52.713 1.67e-36 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Ahy8g2444 AP2 3.90E-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g2444 - - ahf:112708474 548.895