Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g2433 ATGGTACAGGCAAAGAAGTTCAGAGGAGTGAGGCAGCGCCAGTGGGGCTCCTGGGTGTCAGAGATTCGCCACCCTCTCCTGAAGAGGAGGGTGTGGCTGGGAACGTTTGAGACAGCAGAAGCAGCAGCAAGGGCTTATGATCAAGCAGCGATTTTGATGAATGGCCAAAATGCAAAGACCAATTTCCCTTCAACAAAGAACAACCAACAATCTCATCATCATAATAACAATGCAACAACAACAACAACAACAACTTCTTCTTCTTCTTCTTGCAATGATGATTCTTCTTTCTTGTCTCCCAAGGCACTCTCAGAGCTTCTCAGTGCAAAGCTCAAGAAGTGCTGCGGCAAGGACCCTTCTTCTCCTTCCCTCACTTGTCTCCGCCTCGACGCCGACAACTCCCACATCGGCGTCTGGCAAAAGGGCCCCGGAAGACACTCCGATTCCAGTTGGGTCATGAGGGTTGAGCTTGGCAGCAAGAACCACAACCACCAGCAAAAACAACACGAGGGTAATAAGGTCATTTTCCCATCTTCACCAAGTAATAATAACATCACTAACAACAACAATAATAATAATAATGTTGTTGTTATTGGAGAGAATGATGATGAAAATAGAATTGAAGAAGAGAACAGGGTTGCCATGCAGATGATTGAAGAGCTTCTTAATTGGAACAACTATCCATTTGGTAGTTCTTCAAGTAACAATAATAATAATAATTCTCAGCAGCAACAAGAAGATCAGAAAAGGAACCTTCCATGTCACAGTTCTTGA 774 0.4419 MVQAKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKTNFPSTKNNQQSHHHNNNATTTTTTTSSSSSCNDDSSFLSPKALSELLSAKLKKCCGKDPSSPSLTCLRLDADNSHIGVWQKGPGRHSDSSWVMRVELGSKNHNHQQKQHEGNKVIFPSSPSNNNITNNNNNNNNVVVIGENDDENRIEEENRVAMQMIEELLNWNNYPFGSSSSNNNNNNSQQQQEDQKRNLPCHSS* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g2433 257 SUPERFAMILY DNA-binding domain 6 64 IPR016177 GO:0003677
Ahy8g2433 257 CDD AP2 5 63 IPR001471 GO:0003700|GO:0006355
Ahy8g2433 257 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 1 226 - -
Ahy8g2433 257 MobiDBLite consensus disorder prediction 229 257 - -
Ahy8g2433 257 SMART rav1_2 6 69 IPR001471 GO:0003700|GO:0006355
Ahy8g2433 257 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR SHINE 2 1 226 - -
Ahy8g2433 257 PRINTS Ethylene responsive element binding protein signature 7 18 IPR001471 GO:0003700|GO:0006355
Ahy8g2433 257 PRINTS Ethylene responsive element binding protein signature 29 45 IPR001471 GO:0003700|GO:0006355
Ahy8g2433 257 Gene3D AP2/ERF domain 5 64 IPR036955 GO:0003700|GO:0006355
Ahy8g2433 257 Pfam AP2 domain 6 55 IPR001471 GO:0003700|GO:0006355
Ahy8g2433 257 MobiDBLite consensus disorder prediction 58 94 - -
Ahy8g2433 257 ProSiteProfiles AP2/ERF domain profile. 6 63 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g2433 Ahy-Chr8 47029468 47030937 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g2433 1 224 AP2-EREBP Transcription Factor Family AT5G25390 53.125 3.27e-69 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Ahy8g2433 AP2 2.70E-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g2433 - - lang:109326202 235.728