Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g2414 ATGAGTGTGTTCCACGTGAAGGAAAAAGGAACAGAGATAGCGCCGGCGACGATGGAACAGAGCTGCTCGACGGAAAAAGGAGGCGACCCCGGCGACGATGGAACCGAGCTGCGCGACGATGCTTTCAAAGCTGAAACAGATTCTTCCAATAATCTCAACAATAATAATGAAATAATGGATCGTCCCTCTGATGATCTAGAATCTTCCAAGAACAAGAACAATGAAGACACTACTACTATTCCCTCCTCCTTTTCCCCTTTTGGATCCTCCAATCCCAGCATCAGCAATGAAGTAGAAAATTCATCTCCATCAAAGCATCATCATGAACATGATCATGATCTTAATGATGATGATTACTTTCTTGGTGAATCATACACACCAGAGCTTGTTCTGTCACCAGAAACCCAATCAATCTTATTAAGTGGCCTACGTATTGGAGACGATGGTGATCTTCTTGAAGATCTTTGTGATAACAACTTCGAATTTAATGTGGAATCATCACAAGAATGGATAGATAGCAATTTGTTTGCAGATGAGATTCTAGGAATCGAACCTTCCCTTGATCATTATTATTCACCCTACCCCACGGGTAATGAAGAGGACATTGACCTTATGGAAACAGTGCAATGTGATGATGAAGTGAATAATAGCGACCTTGTAATAATTGATGCACCAATTCAGGAAGAGGAAGCACCAAACTTCAAGTTGAAGCCTTTTGGTTTGCATTTGAATAGGCTCATAAAATCTACAAAAAGGGTTCATCCTGAGACACATGAAAATGTTGTAGTTGGGAGTAGTAGTAGTAGTAATAATAAAATAAAAAGCATTTTGATCTCACAAGGTAGCAATGGAAAATCAGTAGTAAGAGCTGTTGTTGATGAGACTCAGAGCCATCAAGACACCACTTCCAATGATTGTGTTCTCATTTCTCATGATCTTAACAAGACAATAATCCAAGAGAATAGTGAGAGTAATAATGGTTGTACATGTAAGAAGAGTGCATGCTTGCTCCTGTACTGTGAATGTTTTGCTGCTAAAGGTTATTGTGCAGAGTGTTGTACTTGTGAAGGATGCTTAAACAGACAAGAACATGAAGACAAAGTTAACGATGCTAGGGACAAAATCAAATCTCGTAATCCATTTGCATTTTCTCCTGAGATGGTTCCATCGGCTAGTAACCAAGAAGAAGAACATGAAGCAACCAAAGATACATCAAGAGAATTGAAACCAAGTAAATTCTTCACTTATTTGCCACGTGTCGGTTTAGTAGAATCAAACACCATCAGCACTAATTCTACAAAACATGATGATGATGATGACAACATTTCTAAAGAGAAACGTAACCAAACTGGTGGAGGATACAAAAAACATGCATCAAACACAAGTGATGGTAAAAGAGGATGTACATGTAAGAAGAATAAATGTGTGAACCTTTATTGTGAATGTTTTCGTGCTGAAATCTACTGTTCTGAGGCTTGTGCTTGCGAAGGGTGCTTAAATAGAGAAGAACATTTACACAAAATTAATGAAGCTAAGGAATATATTAAAAGGCGTTATCCATTAGCATTTGCTCCAAGGATTGTTCAAACTCATCTTTCCTCCCCCAATAATACGGATAATGAAAATGTTAAGACAGCATCATCATCATCAGCAGCAGCAAGGCACAAAAGAGGTTGCAGATGCATAAAGTCAAATTGTATGCAGAAGTATTGTGTATGTTTTGAGATTCAGGTCATTAGCAAGATGCAGAAATGGATGGCAATGAAGAGCAAATAG 1776 0.3851 MSVFHVKEKGTEIAPATMEQSCSTEKGGDPGDDGTELRDDAFKAETDSSNNLNNNNEIMDRPSDDLESSKNKNNEDTTTIPSSFSPFGSSNPSISNEVENSSPSKHHHEHDHDLNDDDYFLGESYTPELVLSPETQSILLSGLRIGDDGDLLEDLCDNNFEFNVESSQEWIDSNLFADEILGIEPSLDHYYSPYPTGNEEDIDLMETVQCDDEVNNSDLVIIDAPIQEEEAPNFKLKPFGLHLNRLIKSTKRVHPETHENVVVGSSSSSNNKIKSILISQGSNGKSVVRAVVDETQSHQDTTSNDCVLISHDLNKTIIQENSESNNGCTCKKSACLLLYCECFAAKGYCAECCTCEGCLNRQEHEDKVNDARDKIKSRNPFAFSPEMVPSASNQEEEHEATKDTSRELKPSKFFTYLPRVGLVESNTISTNSTKHDDDDDNISKEKRNQTGGGYKKHASNTSDGKRGCTCKKNKCVNLYCECFRAEIYCSEACACEGCLNREEHLHKINEAKEYIKRRYPLAFAPRIVQTHLSSPNNTDNENVKTASSSSAAARHKRGCRCIKSNCMQKYCVCFEIQVISKMQKWMAMKSK* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g2414 591 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 466 501 IPR005172 -
Ahy8g2414 591 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 326 361 IPR005172 -
Ahy8g2414 591 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 402 578 IPR044522 GO:0003700
Ahy8g2414 591 MobiDBLite consensus disorder prediction 378 406 - -
Ahy8g2414 591 ProSiteProfiles CRC domain profile. 324 503 IPR005172 -
Ahy8g2414 591 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 4 402 578 - -
Ahy8g2414 591 MobiDBLite consensus disorder prediction 73 100 - -
Ahy8g2414 591 MobiDBLite consensus disorder prediction 1 120 - -
Ahy8g2414 591 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 239 399 IPR044522 GO:0003700
Ahy8g2414 591 MobiDBLite consensus disorder prediction 101 119 - -
Ahy8g2414 591 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 4 239 399 - -
Ahy8g2414 591 MobiDBLite consensus disorder prediction 431 452 - -
Ahy8g2414 591 SMART CXC_2 554 583 IPR033467 -
Ahy8g2414 591 SMART CXC_2 323 364 IPR033467 -
Ahy8g2414 591 SMART CXC_2 463 504 IPR033467 -
Ahy8g2414 591 MobiDBLite consensus disorder prediction 29 45 - -
Ahy8g2414 591 MobiDBLite consensus disorder prediction 392 406 - -
Ahy8g2414 591 MobiDBLite consensus disorder prediction 427 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g2414 Ahy-Chr8 46782968 46791640 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g2414 452 575 CPP Transcription Factor Family AT3G22780 42.636 3.66e-27 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Ahy8g2414 TCR 1.40E-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g2414 K21776 - sind:105164844 142.895