Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g2400 ATGAGAAACCATGAATACGATTTATGCAATCTTCCGGGAGACCTGTTTAGGGAAATCTTGCTGAGGCTTCCAGTGAAGCTCCTCCTGCAGCTGAAGACCGTCTGCCGTTCATGGAACTCCTTCATCTCCAGCCATGAATTCGTCATACACCACCATCAACGCTCAACTCAACCTCGATTAGTGTATTGTAGTTTGGAATCTGAGGGGCTTGACATCATGCAGTGCTCTGTATCATCTCTTCTTTATAATCAGCTTCAACCAACTAGAATCGAGCCACTTCATATTAAATATAAAACCATTAAGGGATCTTGCAACGGGTTGCTTTGCTTGTGTGAAGGTTTTCCCTATAGAACTCTGACGTTGTTCAATCCTTGTACTCGTTCCGTATCCCTAAACGTTCCATTCGAGTACCCCGGCGGCGATTATCTACAACCTGTATTTTGTGGCTTAGGGTATGATGCCCTACGTGACAAGTATAAGTTTGTTACGGGTTCTAAGTCATCTACTGTAGCTGCGGGTCTGTATAGATATAGAGCTAAAGTTTGCACCTTCGATCCAAATCCTTCTTGGAAAACGGTTGATCATCCCATGTTTCCATATTTTACATCTTGTTATAGCGGCACATTTGTTAGTGGCACTCTCAATTGGATGGCGCATGTTCCTGATAAGGATGATGAGTGGTTCATTCTTACCTTTGACTTGGAAACAGAGTCCTTTGGTCGATTATGCCTACCTAGAAACAATCACACTCACACTGGCTCCTGTTACTATGCCCCTTCCATGCAAGTCCTCAAGAACTTCCTTTCTATGAGTTTTCAACCTGCTTGTGATATCAACACTGCTTGCACTATTTGGATAATGAAGGAGTATGGAGTTGAAAAATCTTGGACTGTATTGTTTACGATTCCATTCGGCGATGCAATATTCCGATCAGACATTTGGCTAGAACCCTTGTACATCTTAGAAGATGAAATTCTTTTGGCGTATGGTAAATTCCACTGGAGCAATTTGCTTGTATATAATTTTCGTAAAGGAGAAGTAGTTCATCCTATAGTTGAAGTTGAAGGCTCACGTGACCGTTCAACAATTTGTCCCTTGTCTACATCCGTATATGAGAAGTATTTTCATGTTTATCATGAAAGTATAGTTTCATGTTTACCCTAA 1164 0.4141 MRNHEYDLCNLPGDLFREILLRLPVKLLLQLKTVCRSWNSFISSHEFVIHHHQRSTQPRLVYCSLESEGLDIMQCSVSSLLYNQLQPTRIEPLHIKYKTIKGSCNGLLCLCEGFPYRTLTLFNPCTRSVSLNVPFEYPGGDYLQPVFCGLGYDALRDKYKFVTGSKSSTVAAGLYRYRAKVCTFDPNPSWKTVDHPMFPYFTSCYSGTFVSGTLNWMAHVPDKDDEWFILTFDLETESFGRLCLPRNNHTHTGSCYYAPSMQVLKNFLSMSFQPACDINTACTIWIMKEYGVEKSWTVLFTIPFGDAIFRSDIWLEPLYILEDEILLAYGKFHWSNLLVYNFRKGEVVHPIVEVEGSRDRSTICPLSTSVYEKYFHVYHESIVSCLP* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g2400 387 ProSiteProfiles F-box domain profile. 5 51 IPR001810 GO:0005515
Ahy8g2400 387 PANTHER OS02G0783600 PROTEIN 10 348 - -
Ahy8g2400 387 SUPERFAMILY F-box domain 8 57 IPR036047 GO:0005515
Ahy8g2400 387 SMART fbox_2 11 51 IPR001810 GO:0005515
Ahy8g2400 387 Gene3D - 5 59 - -
Ahy8g2400 387 PANTHER PROTEIN, PUTATIVE-RELATED 10 348 - -
Ahy8g2400 387 Pfam F-box associated 209 307 IPR006527 -
Ahy8g2400 387 Pfam F-box domain 9 47 IPR001810 GO:0005515
Ahy8g2400 387 TIGRFAM F_box_assoc_1: F-box protein interaction domain 103 344 IPR017451 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g2400 Ahy-Chr8 46638269 46639432 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g2400 133 304 Carbohydrate Esterase AT1G25141 24.731 7.14e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g2400 - - adu:107463133 788.489