Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g2398 ATGGGGAAGAAGAAGCAGAAGGAGAAGATAGTTCTTCCACCGGACCTCCCGCCGGAGATTCCCGACGACGAGGTTGAGGTCTCCGATGAGGACCTCCAGTTCGTCAATGAGAATCGCGGTTACGCTTCCTTATTCTCCACCCTTGACACGCAATCAATCACCAAGCATGTTACTCGAGTTGCTGATGCTAAAGATGATGCTTTGGAGAAACTTTATGAGAAACGGCTGCGAAAGAATGCTCTCAAGAAGGAAAAAGAAGAAACAGGAATACAGGTTGACCGAGTTGATGTTCTTCCAATCAAGTCTTTGGATGGACAACTCCATTACCGGACAGCTACAAAGGCAGAATCACAAAATGGTCCAAGTGAAGAGGAAACGGGAGAGGATGTAAATGATAGAAAAAGTCTGGTGAAGCTAACTAAGGCTGAAAAGAGAGCCAAACTTAAGAAGTTGAGGAAGGAGGGGAAAAAGCAAGGGAAAGAGGTGCCAAAAGCAGAAGTGGAACAAACACCACAAGCCACTGTACTGGCTGAGGTAAAAGAAGATCTTACAACTGAGGAGGTTTTTGAATCTAAGAAGTGTAAACTTGCAGAGTTGGGAAATGCATTACTTACAGACCCTGAGTCCAATATTAAATTTCTGAAGGATATGCTACAGATATCTAAAGACAATGATCCTACCATTGTTAAACTTGGACTTCTGTCACTCTTGGCTGTATTTAAAGATATTGTCCCTGGCTATCGAATAAGGCTTCCTACTGAGAAAGAACTGGAAATGAAGGTTTCAAAGACTGTGAGAAAGATGCGTTACTATGAATCAACTCTACTTTCGGCATACAAGGCATACCTGCAAAGGCTGATGTACTTAGAAAAGAAGCCCTTATTTCAACTTGTAGCAGTACGTTGTATTTGTACATTGCTCGACATACATCCTCATTTCAACTTCAGGGAAAACCTGTTGGATGCTACTGTCAGAAACATAAGCTCTACTAATGAGGCCATAAGGAAACTTTGTTGTTCTACAGTTAAATCATTGTTTACAAATGAGGGTAAACATGGTGGTGAGGCTACTGTAGAGGCTGTTCGATTGATTGCCGATCTTGTCAAGGCTAATAATTGTCAGTTGCATCCTGATTCTGTTGAGGTGTTTTTGTCTCTTTCATTCGATGAGGATCTTGGGAAGACTGAGAAGAAAGACGAGGATCAGAAATTTAAAAACAAGAAAAATAAGAAGAGAAAAAACATGGAGGCATCAAATCAGTTGCCAGATAATGATAGAAAGAGAAGTAAGCATGAAATGATCTCTAAGACAAAAGAGGAGGTTGAAGCTGAGTACAAGGCTGCATCGTTTGCCCCAGATGTTATGGAGAGGAGACAAATGCAATCTGAAACACTCTCTGCCGTGTTTGAGACGTATTTTCGCATTTTGAAGCACACGATGCATTTTATAGCAACCAGGCCTGAAGTAAATACTGGGGCATCATCTGCTGCAGTGGAATCCCATCCATTGTTTGCTCCTTGTCTCAAAGGACTGGGAAAGTTTTCACATTTGATTGACCTCGACTTCATGGGGGACCTAATGAACCATCTCAAAGTACTTGCTTCTGATGGTAGTAACTCTGGCAACAGTTCTGAGAAGTGTCCTAAATTTTTGACTGTGACCGAACGTCTCCAATGTTGCATTGTTGCTTTTAAAGTGATGAGGAATAATCTTGATGCTCTGAATGTTGATTTGCAAGACTTCTTCGTCCATCTTTACCGTCTTATACTTGAATACAGGCCTGGAAGAGATCAAGGAGAGGTGTTAGCAGAAGCTTTGAAGATAATGTTGTGTGAAGATAAGCAACATGACATGCAAAAGACTGCTGCATTCATAAAGCGTTTGGCTACATTGTCGCTGTGCTTTGGATCTGCTGAGTCCATGGCTGCATTGGTCACAGTAAGGCATCTCCTTCAAAAGAATGTGAAGTGCAGAAATCTGTTGGAAAATGACACTGGAGGGGGCTCAGTTTCTGGAACAATCCCAAAATATCAACCATATTCCACGGATCCCAATTTAAGTGGAGCTCTTGCTTCTGTGCTTTGGGAACTCAATCTTTTGTCCAAGCATTATCATCCTTCTATATCAACAATGGCCTCTGGTATATCAAGCATGAGTGTTGCACAGAATCAAGTCATTCTCTCAAAAACCTCTCCTACACAAGCTTTAATGGAAATGTCTCTTGATCAGGAATTAACTTTCCCGCAACATGGTGGCACTATAAAGTTGAATAACAAGAAGAGAAGAACAAATGGTCCTGCAACATCACCATCCATTGTTTCTGCATCAGTTACTTCAAGTTCATTCAATGAGGATGAGTTGTATGAGAAACTCGGTTCCCATTTTACGCTTCTTCGCGACATTAGGGAGAATGAAAGGTTGAGAAAGGAGTTGGATAAGACTACACTATCACTACAGCTATATGAACAATATAAGAAACAAAAGCAAAGATCAAAACCAAAGAAGAAAGCCATTGCTTAA 2520 0.4123 MGKKKQKEKIVLPPDLPPEIPDDEVEVSDEDLQFVNENRGYASLFSTLDTQSITKHVTRVADAKDDALEKLYEKRLRKNALKKEKEETGIQVDRVDVLPIKSLDGQLHYRTATKAESQNGPSEEETGEDVNDRKSLVKLTKAEKRAKLKKLRKEGKKQGKEVPKAEVEQTPQATVLAEVKEDLTTEEVFESKKCKLAELGNALLTDPESNIKFLKDMLQISKDNDPTIVKLGLLSLLAVFKDIVPGYRIRLPTEKELEMKVSKTVRKMRYYESTLLSAYKAYLQRLMYLEKKPLFQLVAVRCICTLLDIHPHFNFRENLLDATVRNISSTNEAIRKLCCSTVKSLFTNEGKHGGEATVEAVRLIADLVKANNCQLHPDSVEVFLSLSFDEDLGKTEKKDEDQKFKNKKNKKRKNMEASNQLPDNDRKRSKHEMISKTKEEVEAEYKAASFAPDVMERRQMQSETLSAVFETYFRILKHTMHFIATRPEVNTGASSAAVESHPLFAPCLKGLGKFSHLIDLDFMGDLMNHLKVLASDGSNSGNSSEKCPKFLTVTERLQCCIVAFKVMRNNLDALNVDLQDFFVHLYRLILEYRPGRDQGEVLAEALKIMLCEDKQHDMQKTAAFIKRLATLSLCFGSAESMAALVTVRHLLQKNVKCRNLLENDTGGGSVSGTIPKYQPYSTDPNLSGALASVLWELNLLSKHYHPSISTMASGISSMSVAQNQVILSKTSPTQALMEMSLDQELTFPQHGGTIKLNNKKRRTNGPATSPSIVSASVTSSSFNEDELYEKLGSHFTLLRDIRENERLRKELDKTTLSLQLYEQYKKQKQRSKPKKKAIA* 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g2398 839 MobiDBLite consensus disorder prediction 110 169 - -
Ahy8g2398 839 SUPERFAMILY ARM repeat 211 589 IPR016024 -
Ahy8g2398 839 MobiDBLite consensus disorder prediction 749 773 - -
Ahy8g2398 839 MobiDBLite consensus disorder prediction 413 438 - -
Ahy8g2398 839 PIRSF Noc3 1 835 IPR016903 -
Ahy8g2398 839 MobiDBLite consensus disorder prediction 126 142 - -
Ahy8g2398 839 MobiDBLite consensus disorder prediction 397 438 - -
Ahy8g2398 839 Pfam Nucleolar complex-associated protein 192 282 IPR011501 -
Ahy8g2398 839 MobiDBLite consensus disorder prediction 1 22 - -
Ahy8g2398 839 PANTHER NUCLEOLAR COMPLEX PROTEIN 3 3 782 IPR016903 -
Ahy8g2398 839 Pfam CBF/Mak21 family 557 712 IPR005612 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g2398 Ahy-Chr8 46607574 46615200 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g2398 1 811 Core DNA Replication Machinery Family AT1G79150 58.049 0.0 916
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g2398 K14834 - gmx:100776136 1226.46