Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g2376 ATGGCACAGCCACAGCCACAGCCACAGCAACACCACCATCATCACAACAACAACAATGGCGGTGGTAGCACCACCCAAAAACAACACCACCATGTTCTCCATGACTTTCTCGGCATGAAGCCCAACAACGATATACGCCTCTCTACTGACCTCTCACCTTCCTCTTCCTCCGCCGCTGCACGCGGCCCCTTCTCCTCCTCCGCCGCCTCCGACATCGCTTCCGAAAAACAGGTAGGGAATCATCTTGAAGGGGTTCCATACTATGGTCCACGAAGTGATTTTTCTGGCACCGAGATAAGCAACAGATTAGTGGGAAACAAGAGAAGCAATTCTGATTCTACTTTTATGGGTTCCTCCAGAGATGCCTTCCAAATGGTCCCTGAGTCCTTTCAAAACTCTCATTTGATGAAGGTCCTTCGTAGTGCTGCCGGAGGAGAGAAGCTTAGAAGGCCAAATGATGATGAAGTGTTGCTCGGTATGCAGTCGCTGAAGCCAATGTCTGCTTCTCTATTTCAGCCTCCTACAAGTTCCAAGCTTGATGCCAATAAATGGGAACGATCTTTACTCATGAATGTTGGCCCTTCCATGCAGCATCCCCCGCGTGGAGGTCAACTGACGCCGTTTGTACACCAAATAGCCTCAAACAAAATGAGGGATGCCAATGCCGGTCCTTCATTTATTTCTCAGTCAGCTGCTGATGAAGGATCTAGAACAGGAATTAAGGGCCCTGGCATTTTAAGTTCCATAAACCCAACTGCTTTGGGCATTGAGAAATCATCATCTGCAGGGTTTCTTGGTGGAAGCAGGACAAAGACTGTAAGTAATGTAGTGGACCCCGAATCATCGACACTTCCAAGTCAACATGGCCAAAAATCTTCCAGCCGCCAGATGACTATATTTTACGGGGGTCAGGCTCATGTTTTCGATGATGTCCACCCTCACAAGCTGGAAAAAAGCTCTGTGGCAATCATTGATTCAACTCTGCTTAAGTTTTGGCACCCAGATGGAAGATCACTATTCAGTATTTTCTATTTGAACAGTTATCCTAACCTTTTTCTGGCAGATGTTATAATGTCTTTAGCCGGATCAAATGGCGGATCATGGTCAACTGCATTCTCGCCGAAATCTTCTGTAAAGCTGGCGAATGATAGTAACTTGCATAGTGGAGAGAACGACACGGGTATCCCACATGATCTTCACGGGAGGTTGCCTATTACTGGAAGTTCTAGCCATGCCATTGTGCCTGGTGATCGAATATCTACTCCGGCAGTTGTAGTGGCAAACCAGGGAAGCATTGTATCTAAACATACAAGAAATCCTGTTCAAGCATCTGAACCCAGATCTGAAGACAAAAAAAGAGCACAATGA 1368 0.4678 MAQPQPQPQQHHHHHNNNNGGGSTTQKQHHHVLHDFLGMKPNNDIRLSTDLSPSSSSAAARGPFSSSAASDIASEKQVGNHLEGVPYYGPRSDFSGTEISNRLVGNKRSNSDSTFMGSSRDAFQMVPESFQNSHLMKVLRSAAGGEKLRRPNDDEVLLGMQSLKPMSASLFQPPTSSKLDANKWERSLLMNVGPSMQHPPRGGQLTPFVHQIASNKMRDANAGPSFISQSAADEGSRTGIKGPGILSSINPTALGIEKSSSAGFLGGSRTKTVSNVVDPESSTLPSQHGQKSSSRQMTIFYGGQAHVFDDVHPHKLEKSSVAIIDSTLLKFWHPDGRSLFSIFYLNSYPNLFLADVIMSLAGSNGGSWSTAFSPKSSVKLANDSNLHSGENDTGIPHDLHGRLPITGSSSHAIVPGDRISTPAVVVANQGSIVSKHTRNPVQASEPRSEDKKRAQ* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g2376 455 MobiDBLite consensus disorder prediction 1 72 - -
Ahy8g2376 455 PANTHER PROTEIN TIFY 8 61 452 - -
Ahy8g2376 455 SMART tify_2 290 318 IPR010399 -
Ahy8g2376 455 Pfam tify domain 292 315 IPR010399 -
Ahy8g2376 455 ProSiteProfiles Tify domain profile. 290 325 IPR010399 -
Ahy8g2376 455 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 61 452 IPR040390 -
Ahy8g2376 455 MobiDBLite consensus disorder prediction 1 27 - -
Ahy8g2376 455 MobiDBLite consensus disorder prediction 430 455 - -
Ahy8g2376 455 MobiDBLite consensus disorder prediction 45 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g2376 Ahy-Chr8 46225704 46232533 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g2376 27 317 Tify Gene Family AT4G32570 37.500 7.98e-43 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Ahy8g2376 tify 2.60E-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g2376 - - ahf:112707837 867.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g2602 18 128297490 128304660 Ahy8g2376 8 46225704 46232533 hybridization