Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g2302 ATGAATCTCCCTTCTCTCACTTACTTCCCTCAGAAACTTGTTCCTCCTCTCTGCTCTGCTCTTACCAACTCCACCAGAAGCAGTGGTACTGCTGATAATATTGCTATTGAAGGTTGCAATTTGAAGTTCTCGTTCACAGCAACGAGGCAAGCAAAGGTGGTGCCTGTGCTTAGGGATTGTTCGTTTCGCATTCCTTCTGGGCAGTTTTGGATGCTTCTTGGACCAAATGGGTGTGGAAAATCTACCCTCTTAAAGGTGGTGATGCCAACTGTAGACGCCGATGTTGCATTTGGTCTTGGTAAGTTCAGCTTGACTAATGATGAAGTAAGGTCTAGGGTGTCGAGAGCCTTGCATGCTGTAGGCCTCTCTGACTACGAGAAGAGATCTGTCCAAACTCTGAGTGGTGGTCAGAAGCAGAGGGTTGCAATTGCCGGTGCTTTAGCAGAAGCTTGTAAAGTTCTCTTGTTGGATGAGCTCACAACATTCTTAGATGAAACTGACCAGGTCGGGGTTATCAAGGCTGTTAGAAACTCTTTGGATACATCTGCAGAAGTTACAGCATTATGGGTGACCCATCGTTTGGAAGAACTAGAATATGCAGATGGTGCCATATACATGGAGGATGGGAAAGTTGTCAAATATGGAGATGCAGCTAGCATTAGGAGTTTCATTGAAGCCAAGCAATCTGAATATCTTTCAAATGCATATTAG 711 0.4487 MNLPSLTYFPQKLVPPLCSALTNSTRSSGTADNIAIEGCNLKFSFTATRQAKVVPVLRDCSFRIPSGQFWMLLGPNGCGKSTLLKVVMPTVDADVAFGLGKFSLTNDEVRSRVSRALHAVGLSDYEKRSVQTLSGGQKQRVAIAGALAEACKVLLLDELTTFLDETDQVGVIKAVRNSLDTSAEVTALWVTHRLEELEYADGAIYMEDGKVVKYGDAASIRSFIEAKQSEYLSNAY* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g2302 236 Pfam ABC transporter 108 160 IPR003439 GO:0005524
Ahy8g2302 236 Gene3D - 19 91 IPR027417 -
Ahy8g2302 236 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 36 233 IPR003439 GO:0005524
Ahy8g2302 236 PANTHER ABC TRANSPORTER I FAMILY MEMBER 10 26 87 - -
Ahy8g2302 236 PANTHER ABC TRANSPORTER I FAMILY MEMBER 10 86 233 - -
Ahy8g2302 236 CDD ABC_cobalt_CbiO_domain1 43 210 IPR015856 GO:0005524|GO:0016020|GO:0055085
Ahy8g2302 236 ProSitePatterns ABC transporters family signature. 133 147 IPR017871 GO:0005524
Ahy8g2302 236 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 33 225 IPR027417 -
Ahy8g2302 236 PANTHER ABC TRANSPORTER I FAMILY MEMBER 10 26 87 - -
Ahy8g2302 236 PANTHER ABC TRANSPORTER I FAMILY MEMBER 10 86 233 - -
Ahy8g2302 236 Pfam ABC transporter 57 90 IPR003439 GO:0005524
Ahy8g2302 236 SMART AAA_5 66 210 IPR003593 -
Ahy8g2302 236 Gene3D - 92 235 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g2302 Ahy-Chr8 45259119 45266602 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g2302 127 220 Calmodulin-binding Proteins AT2G36910 38.947 1.24e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g2302 - - gmx:100813654 348.206