LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy8g2284	ATGAAAGACTTCAATGAACAAATAATAGTAAGAAAGAAAGGGGAAAAAAAAAAAACGAAAGCCATGGCCAAAACACGTACCTTTTCTTTTTCAAATTCCCTGCTTCAAACTCTACTTGTCTTCTTCGTAATCACTCCTATAATCACTGCTATTCCAGATTGTAGTGATTCAAGTAATGCCCTCTCTCCTCTATCCACACAATCTTCATCTCCATGGACTTCACCATCCAAAGATTTTGCCTTCGGTTTCCAATTTGTTCAATTCAAGGATCCACGCTATGTCCCTCTGCTCTCCATCTATTTCACCAAATCACCCAACAAGCCCATTGTTTGGTACGCGAAACCCAACCAGGAAATCCCGGTTGGGTCCTCTATCAATATCACAAACAATAGTCTCGTCATATATAACCCCAAAGGAAGTGAAATTTGGTCCCGTCCAGAAAAGAAGGACAAAATGGTAACTTGTGCTTCTATGAAAGATAATGGAAACTTTGTTCTTAAAGACAAAGACGGTAATATAGTTTGGGAGAGTTTTGAAGAACCAAGCGACACGCTTCTCCCCGGTCAGAATTTTTCCAAGTCTCAACCATTCAATTTGCAAGCTCGTCAATCGGAAACAAATTTCTCAACTAGCAATAACTTCAATCTCAGCTGGCAAGACGATGGCAATTTGGTACTTTACTATTCTCAAAATCACCAAGAACATGAACAGGCGCAGAATTATGCATACTGGGCAACCGGAACTGACGGTCGCGGATCGCGTTTATTCTTCGATGAGTTCGGACGGATTTACGTTACGGATGATAATAACACGAAGCTGTTCCAAGTAACAAACGGGATCCCAGGTTCAACTCAATATTTTTACATGGCGAGAATTGAATCTGATGGAGTCTTCAGGCTGTACGATTATTACCAGAAGACTAAAACAGTTAAAAACGAGGAGGATAACTGTTCTTCTGGATGGAAAGAGTTGGAACAAGAACCTGATGATATATGTGTTCTTAACATAGCTCAGAATGAAAATTTTATCTGTGGGCCTAACAGTTATTGTGTTTCCATGAATGGAAAGCCTCAATGCATGTGTCCGCATAATTATTCCTATTTTGTGCAGCCTAATGATCCAAACAACTTAACAAGTTGTAGGCCGGATTTTCCGCCTCCCAGCTGTCTGGTCGACGGCTGGGAGACGGATCCGGCCAAGGTGGATTTCCAAGAATGGCAGAATTTGAACTGGCCTTTCTCCGATTACGAGTTGGTGAGCGGTGATTTCGATAAGTACACGTGTCGAGAAAGGTGCCGTGGCGATTGCTTCTGTGCTGCGGCTGTATACAACGTTGATAAGGACAACGTGGCACATTGTTGGAAGAAGAAGTACCCTTTGAGTAATGGAAGGTCTAGTAGGACAGCCGAAAATGGAACAATAGTGTTCCTCAAGTTTCGCAAGGCAGGGTATGAAAACCAACATCGATCTTATTTAACACTTATTTTGTCGTTTCTTCTTGGAAGCTCGGTTTTCCTCAACATTCTGTTGGTGTTGGGAATTCTTGGAATTTACATGTTCTTGCGCAAGAGAAAGATGTTAGGGCAGCAACTGGTTGCGAGCTTGGCGCCGGAGACGGTTAGAAGCTACACATACAAAGAGCTTGAGAAGGCGACACGTGGATTCAAACAGAGATTGGGTCAAGGTGCTTTTGGAACTGTGTATAAAGGGGTATTAGAATTAGGGTCTAATACGAAAAGATACGTAGCTATTAAAAAGTTAGATAAGGTGGTTGAAGAAGGTGAAAATGAATTCAAAACAGAGGTGAGTGTGATAGGCCAAACCCACCACCGGAATTTGGTTCGCTTGCTTGGTTACTGCGACGAAGGGGAGCATCGTCTTCTTGTGTATGAGTACATGAGCAATGGTTCATTGGCGAGCTTTCTTTTTGGGATTTCTAGGCCTCATTGGAATCAAAGAGTGCAAATTGGATTGGGAATAGCTAAAGGACTCACATACTTGCATGAAGAGTGTAACACCCAATGCATTCATTGCGATATAAAGCCTCAAAACATTCTTCTGGACGACTTATTTGCGCCCAGGATATCCGATTTTGGGCTGGCAAAGCTGTTGTTGGCAGAGCAAACTCGCGCCACTAAGACGCACGCGAGAGGGACTATTGGATACTTTGCACCTGAATGGTTTACAAAAGCTTCAATCACAAGCAAAGTGGATGTTTATAGCTTTGGAGTGGTGCTGCTAGAGCTCATATGCTGCAAATCCAGTATTGTGTTTTCAATGTCAAATGATGAAGAACAAGCGCTTATAGATTGGGCATATGATTGTTACAAACATGGAAAATTGGTTCAGTTTGTTGAGAATGATGAGGAGGCAAAGAATGATATTAGGAGGGTAGAAAAACATGTTATGGCAGCAATTTGGTGCGTTCAAGATGATCCTTCACTAAGGCCTTCTATGAAGAAGGTTGCTCAAATGCTTGAGGATGTTATTGCTGTACCTTTGCCACCTCGACCTTCCATGTTTTGTTCATCATCTGCAACTTCGTTAAGTAGTGTTTCTTTTTGA	2565	0.4207	MKDFNEQIIVRKKGEKKKTKAMAKTRTFSFSNSLLQTLLVFFVITPIITAIPDCSDSSNALSPLSTQSSSPWTSPSKDFAFGFQFVQFKDPRYVPLLSIYFTKSPNKPIVWYAKPNQEIPVGSSINITNNSLVIYNPKGSEIWSRPEKKDKMVTCASMKDNGNFVLKDKDGNIVWESFEEPSDTLLPGQNFSKSQPFNLQARQSETNFSTSNNFNLSWQDDGNLVLYYSQNHQEHEQAQNYAYWATGTDGRGSRLFFDEFGRIYVTDDNNTKLFQVTNGIPGSTQYFYMARIESDGVFRLYDYYQKTKTVKNEEDNCSSGWKELEQEPDDICVLNIAQNENFICGPNSYCVSMNGKPQCMCPHNYSYFVQPNDPNNLTSCRPDFPPPSCLVDGWETDPAKVDFQEWQNLNWPFSDYELVSGDFDKYTCRERCRGDCFCAAAVYNVDKDNVAHCWKKKYPLSNGRSSRTAENGTIVFLKFRKAGYENQHRSYLTLILSFLLGSSVFLNILLVLGILGIYMFLRKRKMLGQQLVASLAPETVRSYTYKELEKATRGFKQRLGQGAFGTVYKGVLELGSNTKRYVAIKKLDKVVEEGENEFKTEVSVIGQTHHRNLVRLLGYCDEGEHRLLVYEYMSNGSLASFLFGISRPHWNQRVQIGLGIAKGLTYLHEECNTQCIHCDIKPQNILLDDLFAPRISDFGLAKLLLAEQTRATKTHARGTIGYFAPEWFTKASITSKVDVYSFGVVLLELICCKSSIVFSMSNDEEQALIDWAYDCYKHGKLVQFVENDEEAKNDIRRVEKHVMAAIWCVQDDPSLRPSMKKVAQMLEDVIAVPLPPRPSMFCSSSATSLSSVSF*	855

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy8g2284	854	Gene3D	Phosphorylase Kinase; domain 1	519	632	-	-
	Ahy8g2284	854	SUPERFAMILY	Protein kinase-like (PK-like)	536	826	IPR011009	-
	Ahy8g2284	854	PANTHER	G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5	30	848	-	-
	Ahy8g2284	854	SUPERFAMILY	alpha-D-mannose-specific plant lectins	206	302	IPR036426	-
	Ahy8g2284	854	Gene3D	-	60	178	IPR036426	-
	Ahy8g2284	854	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	675	687	IPR008271	GO:0004672\|GO:0006468
	Ahy8g2284	854	ProSiteProfiles	Bulb-type lectin domain profile.	58	179	IPR001480	-
	Ahy8g2284	854	ProSitePatterns	Protein kinases ATP-binding region signature.	559	586	IPR017441	GO:0005524
	Ahy8g2284	854	Gene3D	-	180	311	IPR036426	-
	Ahy8g2284	854	SMART	blect_4	63	181	IPR001480	-
	Ahy8g2284	854	Gene3D	Transferase(Phosphotransferase) domain 1	633	832	-	-
	Ahy8g2284	854	SMART	serkin_6	553	830	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Ahy8g2284	854	ProSiteProfiles	Protein kinase domain profile.	553	830	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Ahy8g2284	854	PANTHER	-	30	848	-	-
	Ahy8g2284	854	Pfam	D-mannose binding lectin	109	195	IPR001480	-
	Ahy8g2284	854	Pfam	Protein tyrosine and serine/threonine kinase	555	826	IPR001245	GO:0004672\|GO:0006468
	Ahy8g2284	854	CDD	STKc_IRAK	559	827	-	-
	Ahy8g2284	854	PIRSF	SRK	29	853	IPR024171	GO:0004674
	Ahy8g2284	854	SUPERFAMILY	alpha-D-mannose-specific plant lectins	107	247	IPR036426	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy8g2284	Ahy-Chr8	45097329	45100088	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy8g2284	536	841	Receptor kinase-like Gene Family	AT5G38280	40.256	8.45e-68	236

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_SD-2b	Ahy8g2284		PK_Tyr_Ser-Thr	1.30E-49	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy8g2284	-		-	ahf:112707732	1674.06