Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g2266 ATGAGTGTTGTGTATAGTCATGCTTTAAAATACTCCCAAGAAATGGATTCAAACAACATTAATTCTGGATTATTAAGGTACCGTTCTGCTCCAAGCTCAATGCTCACAAGCCTTATGGATAACATCCACGACGGCGGCGGCGGTGGCGGCGACGAAGAAGCCTTGAGAACTGAATTGGAAAAGTTGATCTCATCCAACAACAAAAGCAAACATGTTAACAATTCTTCAGAGCATTTGAAGAGAGAAGAAGGCAACAACAATTATAATTACTCTTTTGGGTCTCAGAATCATGTTATTTACCAAAACAACCAGCACTACCATCAAATTCATCAAGGGTTGGCAATGGCATCATCATATAATAATGGTTTTGATGGAACATTATTTGGTGCAACGAACTCAATGGATTCAGAGAATAATAATGATAATGGCACACAAAATAAAATGGGTTCCAATCTCATTAGGCAAAAGAGTTCTCCAGCTGGTTTTTTCTCCAATTATTCAATTGATAATAATGGTACAACAACATCATCAAGAAGTAGTAGTGGATTGCAATGCACTTTGAACTTCTCATCAAGATCATCCTCTTGCTCCAAAAGCCGCATGCCACAAATTGTTGAGAGTGGAAATGAAGGCATGGAATCAAATTGTGTTGAAAATAGAAACCTAATAATAAGGAATGATGATAGTAATAATAATAATAACAATAATGGCAGTACTAAGTGTTATATGCCAAGATTCACTGGTGACGTTTGGGATGCTTCTGAATTCAATTCCTCCAAAAGAGGCACTAACAATGGTGAAATCATGTTTTCCACTTCAAATGCTATGGAAGCTCAGGATGTAGATTTTGGATATCAAAAGGTTGGTTTGACCCACCATTTAAGTCTACCTAGTTCTTCTACCAAGATTGGTGGCATGGAAAAGCTTTTTCAAATTCAAGGATCTGCTCCATGTAAGATTAGAGCCAAAAGAGGATTTGCCACTCACCCAAGAAGCATTGCAGAGAGGGAAAGAAGAACAAGAATAAGTGCAAGAATCAAGAAACTACAAGACCTTTTCCCAAAATCGGACAAGCAAACAAGTACTGCAGATATGTTGGATTTGGCAGTTGATTATATCAAAGGCCTTCAAAAACAAGTCAAGATACTCACAGATACAAGGGCAAAGTGCAACTGTTCAAGTAATTATCAGAAAGAACAATGA 1203 0.3741 MSVVYSHALKYSQEMDSNNINSGLLRYRSAPSSMLTSLMDNIHDGGGGGGDEEALRTELEKLISSNNKSKHVNNSSEHLKREEGNNNYNYSFGSQNHVIYQNNQHYHQIHQGLAMASSYNNGFDGTLFGATNSMDSENNNDNGTQNKMGSNLIRQKSSPAGFFSNYSIDNNGTTTSSRSSSGLQCTLNFSSRSSSCSKSRMPQIVESGNEGMESNCVENRNLIIRNDDSNNNNNNNGSTKCYMPRFTGDVWDASEFNSSKRGTNNGEIMFSTSNAMEAQDVDFGYQKVGLTHHLSLPSSSTKIGGMEKLFQIQGSAPCKIRAKRGFATHPRSIAERERRTRISARIKKLQDLFPKSDKQTSTADMLDLAVDYIKGLQKQVKILTDTRAKCNCSSNYQKEQ* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g2266 400 Gene3D - 328 398 IPR036638 GO:0046983
Ahy8g2266 400 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 16 396 - -
Ahy8g2266 400 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 16 396 - -
Ahy8g2266 400 Pfam Helix-loop-helix DNA-binding domain 332 377 IPR011598 GO:0046983
Ahy8g2266 400 SMART finulus 332 382 IPR011598 GO:0046983
Ahy8g2266 400 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 326 376 IPR011598 GO:0046983
Ahy8g2266 400 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 329 392 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g2266 Ahy-Chr8 44917217 44921302 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g2266 16 382 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G42280 34.704 4.48e-44 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy8g2266 HLH 3.40E-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g2266 - - gmx:100795896 387.882