Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g2253 ATGACAGATCCTCAATCCAATTCTTTAGATGATGATGGATTCTTCAACTTCATGCCTCTCCACCCTCCTCACCACTCTTCTTCATCTTCTTCTCAATCCAATTTGCACCCATTTGCATACTTAAACACAAGATTTCATCATCAACAACAACAATCTGAAGCTTCTTCATCTTCCTCCGAATATCTTCTTCCTACAAATTCTAATTCCCCTCCTCTTAAAGAAGCACTTCCTCTCATAAACAAACTAAGCCTCACAAATCACCAACAAAACAACCACAAGGGTGCACTCCCATATCCAGATTCTATTAATTACGAGAACGAAGACGAAGACGAAGAAGAGGATAATGAAACTGTGGCTGTTGCACTGCGCATAGGGCTTCCAAGAATGGATACTTCTTATGATCTTCAACCTTCAACAAAGGAAGCTATGGCTGATGAGAAACAGCAAGAAGAACAAGTGAATAATAATAATGTGTTTTCTGGAAACCCTTTTGAGAGATTCAACAATAACAACAACAACAACATCAACAATAATAAGAGTCACTATTGGATTCCCACACCTTCTCAGATTCTAATTGGACCTACACAGTTCTCATGCCCTCTTTGCTCCAAGACCTTCAACAGATACAACAATCTTCAGATGCATATGTGGGGACATGGATCACAATACAGAAAGGGACCTGATTCTCTAAAAGGAACACAACCAACAGCAATGCTAAGGCTTCCATGTTTTTGTTGTGAACAAGGTTGTAAGCACAACATTGACCACCCAAGGGCAAGGCCCTTGAAGGATTTTAGAACCCTCCAAACACATTACAAGAGGAAGCATGGCATCAAACCCTACTTGTGCCGGAAGTGCCGGAAGTCCTTCGCCGTCAAAGGTGACTGGCGGACGCATGAGAAGAACTGCGGCAAGGTTTGGTATTGTTTGTGTGGATCTGATTTCAAGCACAAGAGGTCACTTAAGGATCATATTAGAGCCTTTGGAGATGGACATGGAGCCTTTGGGATTCAGAGCTTGCATGAATTTGAAGATGAAGCTCCCTCAGAAGCTGAACATGATGGGGAGAGTAGTTCTTTGTGA 1083 0.4201 MTDPQSNSLDDDGFFNFMPLHPPHHSSSSSSQSNLHPFAYLNTRFHHQQQQSEASSSSSEYLLPTNSNSPPLKEALPLINKLSLTNHQQNNHKGALPYPDSINYENEDEDEEEDNETVAVALRIGLPRMDTSYDLQPSTKEAMADEKQQEEQVNNNNVFSGNPFERFNNNNNNNINNNKSHYWIPTPSQILIGPTQFSCPLCSKTFNRYNNLQMHMWGHGSQYRKGPDSLKGTQPTAMLRLPCFCCEQGCKHNIDHPRARPLKDFRTLQTHYKRKHGIKPYLCRKCRKSFAVKGDWRTHEKNCGKVWYCLCGSDFKHKRSLKDHIRAFGDGHGAFGIQSLHEFEDEAPSEAEHDGESSSL* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g2253 360 ProSiteProfiles Zinc finger C2H2 type domain profile. 197 224 IPR013087 -
Ahy8g2253 360 SUPERFAMILY beta-beta-alpha zinc fingers 190 219 IPR036236 -
Ahy8g2253 360 MobiDBLite consensus disorder prediction 88 114 - -
Ahy8g2253 360 MobiDBLite consensus disorder prediction 1 73 - -
Ahy8g2253 360 SMART c2h2final6 197 219 IPR013087 -
Ahy8g2253 360 SMART c2h2final6 244 276 IPR013087 -
Ahy8g2253 360 SMART c2h2final6 281 301 IPR013087 -
Ahy8g2253 360 Gene3D Classic Zinc Finger 196 219 - -
Ahy8g2253 360 PANTHER ZINC FINGER PROTEIN WIP2-LIKE 1 354 - -
Ahy8g2253 360 MobiDBLite consensus disorder prediction 22 73 - -
Ahy8g2253 360 ProSitePatterns Zinc finger C2H2 type domain signature. 199 219 IPR013087 -
Ahy8g2253 360 PANTHER ZINC FINGER PROTEIN WIP2 1 354 IPR043584 GO:0003700|GO:0010468
Ahy8g2253 360 SUPERFAMILY beta-beta-alpha zinc fingers 265 301 IPR036236 -
Ahy8g2253 360 Gene3D Classic Zinc Finger 279 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g2253 Ahy-Chr8 44733393 44737679 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g2253 65 352 C2H2 Transcription Factor Family AT1G51220 57.679 1.00e-112 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Ahy8g2253 None None None