Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g2248 ATGGTTGATATCAGCAATTCCTTGCTCTCACCAGGAGAAGAAGAGAACCATATTGAAATCCAAGAGAGTAATAATGATGAACAACACAGTCTTGCCATCACCAACTACACCGGAGAGGCAAGAGATGATTTGAGTGCATCAATTAATCACTTCGTGGAGACTCTAAATCACTTCAACTTGCGCAATTTGGGGTACCCTAGTAATCAAGAGTTGAAGTATGATGGATTGGGAGCATTGCTTAATTATCCCATAAACAATGCAGGAGATCCCTTTAAAGGGAGCAGCTTTGGTCTAAACTCATCGGAATTCGAAGTGTGCGTGCTTGATTGGTTTGCAAAGTTATGGGACATACACAAGGGTCACTACTGGGGATACGTCACTACCGGTGGGACTGAAGGAAATCTTCATGGCATTTTAATAGGGAGAGAGCAACTTCCAGATGGAATTCTATATACTTCACAGGATTCACATTATTCAATATTCAAAATAGCAAGAATGTATCGAATGCAATGCGTGAAGGTTGCCACTTTGATCTCTGGTCAGATTGATTGCAATCATTTAAAGGCTTTACTACTTGCTCACAGGAATAAGCCAGCCATTATCAATCTTAACATAGGGACAACTATGAAAGGAGGAGTTGACGACCTTGATCTTGTAATACAGACACTTGAAGAATGTGGTTTCACTTCTGATCGATTCTATATTCACTGTGATGCAGCATTGTTTGGAGTGATGCTGCCTTTTCTCAAGAGAGCACCAAAGATTACCTTCCAGAAATCCATTGGAAGTGTAACTATTTCTGGCCATAAGTTCTTGGGATGTCCAATTCCATGTGGTGTTGTAATAACTCGTTTGAAATACATCAATAATGCCCTATCCAAGGATGTTGAAATCATTGGTTCAAGGGATGCTACAATAACAGGTAGCCGTTGTGGACATACCCCTATCTTCCTTTGGTATCGTCTCAAAAGCAAAGGATTAAAAGGGCTCAAGAAAGACGTTGAGAAGTGCATAATGAATGCAAGTTACTTACATGGTCGATTGCGTGGTGCTGGCATTGGTGCAATGTTGAATGAGTTTAGTAACATCGTTGTGTTTGAGAGGCCTCAATTAAATGCTGATAATGATGACTTTACTCGTCGGTGGAGTTTGGCGTGCCAAGGGAAAATTGCGCACGTTGTTGTCATGCAGCACGTGACCACTAAAATGCTTGACTCTTTTGTTAGTGAGTTTCTTCAGAAAAGGTTTCAGGCTCAGTGCATTGCAGACCATGTTGGTTCCTCAAATTGTTCTTGTTCCATGCATGATGGTTTTCTTCATTGA 1323 0.4097 MVDISNSLLSPGEEENHIEIQESNNDEQHSLAITNYTGEARDDLSASINHFVETLNHFNLRNLGYPSNQELKYDGLGALLNYPINNAGDPFKGSSFGLNSSEFEVCVLDWFAKLWDIHKGHYWGYVTTGGTEGNLHGILIGREQLPDGILYTSQDSHYSIFKIARMYRMQCVKVATLISGQIDCNHLKALLLAHRNKPAIINLNIGTTMKGGVDDLDLVIQTLEECGFTSDRFYIHCDAALFGVMLPFLKRAPKITFQKSIGSVTISGHKFLGCPIPCGVVITRLKYINNALSKDVEIIGSRDATITGSRCGHTPIFLWYRLKSKGLKGLKKDVEKCIMNASYLHGRLRGAGIGAMLNEFSNIVVFERPQLNADNDDFTRRWSLACQGKIAHVVVMQHVTTKMLDSFVSEFLQKRFQAQCIADHVGSSNCSCSMHDGFLH* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g2248 440 SUPERFAMILY PLP-dependent transferases 72 411 IPR015424 -
Ahy8g2248 440 PANTHER SERINE DECARBOXYLASE 14 435 - -
Ahy8g2248 440 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 263 284 IPR021115 GO:0016831
Ahy8g2248 440 Pfam Pyridoxal-dependent decarboxylase conserved domain 102 351 IPR002129 GO:0016830|GO:0019752|GO:0030170
Ahy8g2248 440 Gene3D - 81 322 IPR015421 GO:0003824
Ahy8g2248 440 PANTHER - 14 435 - -
Ahy8g2248 440 Gene3D Aspartate Aminotransferase, domain 1 323 415 IPR015422 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g2248 Ahy-Chr8 44619591 44626188 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g2248 162 344 Calmodulin-binding Proteins AT1G65960 26.702 8.95e-07 48.9