Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g2197 ATGGCATCTTCAAATTCACCATGCGCAGCATGCAAATTTCTTCGAAGAAAATGCCAACCAGAGTGCGCTTTTGCACCATACTTCCCACCAGATCAGCCTCAGAAGTTCGCGAATGTTCATAGAATCTTCGGTGCAAGCAATGTTACAAAGCTTCTCAACGATTTACACCCTCACCAGCGCGAAGACGCCGTGAATTCCCTTGCGTACGAGGCGGAGATGCGCCTTCGCGACCCGGTCTATGGTTGCGTCGGCGTTATCTCCCTCCTCCAGCACCAGCTCCGGCAACTTCAGGTGGATCTTTACTGCGCTAAATCGGAGCTATCTAGGTACCAAAATTTGAGTATCAACGCCAACCACGCCTTCGTTGGTAGTGAATCTGGTGCCGTGGGATACCAACACCAGCAGAATAATAATTCTGGTTCTGCTGGTATTGGAACCCGCGACAACAGCAGTTACTACCAACACCATCACCATCACCACCACCATCAATTCTTTCCGCAACAACAGATGGTAAGAAGTTTTGATGGAGGGAGCAATTATGATGCTAGTCTCTTGGCTATGAACATCTCCGCTAGCTTAGGGCAGCTCAATCAGCTTCCGGCTGGCGGCGGTGACGACCGCCGCACCGTCAACAACCCTTCCTAG 645 0.5085 MASSNSPCAACKFLRRKCQPECAFAPYFPPDQPQKFANVHRIFGASNVTKLLNDLHPHQREDAVNSLAYEAEMRLRDPVYGCVGVISLLQHQLRQLQVDLYCAKSELSRYQNLSINANHAFVGSESGAVGYQHQQNNNSGSAGIGTRDNSSYYQHHHHHHHHQFFPQQQMVRSFDGGSNYDASLLAMNISASLGQLNQLPAGGGDDRRTVNNPS* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g2197 214 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 3 180 - -
Ahy8g2197 214 PANTHER LOB DOMAIN-CONTAINING PROTEIN 6-LIKE 3 180 - -
Ahy8g2197 214 MobiDBLite consensus disorder prediction 130 150 - -
Ahy8g2197 214 MobiDBLite consensus disorder prediction 130 163 - -
Ahy8g2197 214 Pfam Lateral organ boundaries (LOB) domain 7 103 IPR004883 -
Ahy8g2197 214 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g2197 Ahy-Chr8 43882276 43883949 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g2197 2 214 AS2 family AT1G65620 60.465 2.71e-77 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Ahy8g2197 LOB 3.00E-42 No_clan