Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g2156 ATGGACAAGAAGCAACACGAAAAACATAAACATCGAATTGGGAATGCATTGCGCCATAATTGGGGAAAGAAAGATCATGAGAATAAAGCTCCAAAGAAAACCAACTCATCATTGGCAGGTATGGTTGAATTTGTTGGATTAATTAAGGTTAATGTGGTAAAAGGCACTAACTTGGTTGTTCGAGATGTAGTGTCTAGTGACCCTTATGTTGTCCTTTCTTTGGGTGACCAATCAGTAAAAACACGTGTCATAAAGAAGAGTTTGAATCCAGTGTGGAATGAGAGCCTAATGTTGTCAATTCCAGAAAACATTCCTCCCCTTAAAGTGTGTGTATATGATAAGGACAAATTTTCAAACGATGATTTTATGGGTGAGGCTGAAATAGACATTGAACCTCTAGTGATAGCTACAAAAGAATATGAGGAGTCTAAAAGCTATGAGCATATGCAACAACAACATGGGGGATGTGGTTCAATCACAGAAAACACTTCCATTTGTGAAGATGATGCTAATGCCAATCACAAAGGAGAGATGAAACAACATTTCTCAATTAGGTTACAAAATGTTGAGAGTGGTGTGTTAGAGATTGAGATTGAATGTGTTCCTCTTACTCAATAA 618 0.3722 MDKKQHEKHKHRIGNALRHNWGKKDHENKAPKKTNSSLAGMVEFVGLIKVNVVKGTNLVVRDVVSSDPYVVLSLGDQSVKTRVIKKSLNPVWNESLMLSIPENIPPLKVCVYDKDKFSNDDFMGEAEIDIEPLVIATKEYEESKSYEHMQQQHGGCGSITENTSICEDDANANHKGEMKQHFSIRLQNVESGVLEIEIECVPLTQ* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g2156 205 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 43 140 IPR035892 -
Ahy8g2156 205 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 6 205 IPR044518 GO:0005096|GO:0005543
Ahy8g2156 205 ProSiteProfiles C2 domain profile. 29 144 IPR000008 -
Ahy8g2156 205 SMART C2_3c 47 142 IPR000008 -
Ahy8g2156 205 Gene3D C2 domain 44 202 IPR035892 -
Ahy8g2156 205 Pfam C2 domain 47 136 IPR000008 -
Ahy8g2156 205 MobiDBLite consensus disorder prediction 1 17 - -
Ahy8g2156 205 MobiDBLite consensus disorder prediction 18 32 - -
Ahy8g2156 205 PANTHER CALCIUM-DEPENDENT ARF-TYPE GTPASE ACTIVATING FAMILY PROTEIN 6 205 - -
Ahy8g2156 205 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g2156 Ahy-Chr8 43126847 43130238 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g2156 33 205 C2H2 Transcription Factor Family AT4G21160 48.876 6.96e-52 168