Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g2143 ATGAAAATCCCATCAATGCCATCATCACCCTCCATCTCCTTTGTTCTCTTCCTTTTATTCCTCACTGTACCATTACTACAAGCCCAACAACAATCTCCATCAAAAAACGCCCCTCCTCCTCCCCCTTCATTGCCTCCGCCTGCTTCGGCTCAAAAACATTTTCCTCCTCCACCTCCACCTCCACTTACTTTTTCGACTCGAAAAGTTGCTCCACCTCCTCCTCCTCCTTCACTGCCTCCACCTGCTTCGGCTCTAAAATATTTCCCTCCTCCACCTCCTCCTTATTTTCCTCGAAAATATGCTCCTCCTCCTCCCCCTTCCTCTTCCTCTTCGGCTCCAATGCTTACCCCTCCTTCTCCGCCTTCAAAACACTCCCCTCCTCCGTCTCCACTACCACCTTCTACCTCTTCAGCTCCTCCCTCTCCTTCTCCAGTTTCTCCTCCTCCTTCTCCTTCCTCCAAAGAAGCCTGCAAGTCTACACTGTACCCAAAACTCTGCCGCTCCATTCTAAAATCCATTCGCTCGTCACCATCCGATCCATACAACTTAGGGAAATTCTCCATCAAACAAAGCCTCAAAAAGGTAAAGAAGCTGGCAAAAGCGTTCGATGACTTCCTCCACCACAAGTCGTCTTCTTACCTCAACCAAGCCGAGATCTCGGCTCTCGACGACTGCCGCGACCTCAACCAACTCAACGTAGACTACCTCCAAACCGTCTCCGACAACCTCAAATCTGCGACCTCGTTAGACAGCAATGGAAATGAGGAATTGGTGGAGGACATCGAAACGTATCTGAGTGCGGTGGCTACTAACCACTACACTTGCTATGATGGGTTGGTGGCGGCGAAGAGTAACATCGCGGAGGCGCTGGCGGTGCCTCTGAACGATGTGAAGCAACTGTATAGTGTGTCGCTTGGGTTGGTTACGGAGGCTCTGAACAAGAATAGGAAGAAGCATAAGACAAGAAAGCATGGTCTCCCTACTAATGACTACAAAGTTAGACAGCCTCTCAAGAAGCTCATTAAGTTTCTTCACACAACAAGTAATAGTTGCAAAGAATCATCATTCAATTGTACAAGGAAAAGCGAAAGGATTCTTGAAGAAAGCAATAACAGCAAAGGAATTCTACTGAACAGCTATGTGATTGTGAGCATTGATGGGACAGGGAACTTCACTTCCATTGGAGACGCCATTGCTTTTGCTCCGAACAATTCAAGAGCAGAAGATGGGTATTTCCTTATCTATGTCACAGAAGGGTGCTACGAGGAATATGTCACTATCCCCAAACAAAAGACTAACATTTTGCTTGTTGGAGATGGTATCAATAAGACTGTTATCACAGGGAATCATAGTGTCATTGATGGTTGGACAACTTTCAATTCTTCAACTTTTGCTGTTTCTGGAGATAGATTCATGGCAGTGGATATTACATTCAGAAACACAGCTGGCCCTGAGAAGCACCAAGCAGTAGCACTTAGAAGCAACGCTGACCTCTCCACCTTCTACCGATGCAGTTTTGAAGGATATCAAGACACACTCTACGTTCACTCTCTCAGACAATTTTACAGAGAATGTGACATCTATGGAACGGTAGACTTCATCTTTGGTAACGCCGCCGTAGTTTTCCAGAGCTGCAACATCTACGCAAGAAAGCCAATGACTAACCAGAAAAACTCCGTCACCGCGCAAGGCCGGACGGATCCAAACCAAAACACCGGAATCTCAATCCAAAATTGCACCATCCAGGCCGCCCCTGACTTGGCGGCCGACGTGGAATCCACGCCGAATTACTTAGGTAGGCCGTGGAAAGAGTACTCGAGGACGGTTTATATGCAGTCATATATTGGTGCCTTGATTAGTCCTTCTGGATGGTTAGAGTGGAATGGGACCGTTGGGTTAGACACACTCTTCTATGGTGAATTTAATAACTATGGTCCTGGTGCTGGTACAAGTAACAGAGTAAAATGGAAGGGTTACAACTTGTTGAATGCTACTCAAGCTTGGAATTTTACTGTTCTTAATTTTACTTTGGGAGATACATGGCTTCCTTACACTGATATACCATACACTTCAGGCCTAGAAGATTAA 2088 0.4636 MKIPSMPSSPSISFVLFLLFLTVPLLQAQQQSPSKNAPPPPPSLPPPASAQKHFPPPPPPPLTFSTRKVAPPPPPPSLPPPASALKYFPPPPPPYFPRKYAPPPPPSSSSSAPMLTPPSPPSKHSPPPSPLPPSTSSAPPSPSPVSPPPSPSSKEACKSTLYPKLCRSILKSIRSSPSDPYNLGKFSIKQSLKKVKKLAKAFDDFLHHKSSSYLNQAEISALDDCRDLNQLNVDYLQTVSDNLKSATSLDSNGNEELVEDIETYLSAVATNHYTCYDGLVAAKSNIAEALAVPLNDVKQLYSVSLGLVTEALNKNRKKHKTRKHGLPTNDYKVRQPLKKLIKFLHTTSNSCKESSFNCTRKSERILEESNNSKGILLNSYVIVSIDGTGNFTSIGDAIAFAPNNSRAEDGYFLIYVTEGCYEEYVTIPKQKTNILLVGDGINKTVITGNHSVIDGWTTFNSSTFAVSGDRFMAVDITFRNTAGPEKHQAVALRSNADLSTFYRCSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAVVFQSCNIYARKPMTNQKNSVTAQGRTDPNQNTGISIQNCTIQAAPDLAADVESTPNYLGRPWKEYSRTVYMQSYIGALISPSGWLEWNGTVGLDTLFYGEFNNYGPGAGTSNRVKWKGYNLLNATQAWNFTVLNFTLGDTWLPYTDIPYTSGLED* 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g2143 695 MobiDBLite consensus disorder prediction 98 157 - -
Ahy8g2143 695 SMART PMEI_2 148 307 IPR006501 GO:0004857
Ahy8g2143 695 Gene3D Invertase/pectin methylesterase inhibitor family protein 154 311 IPR035513 -
Ahy8g2143 695 ProSitePatterns Pectinesterase signature 2. 527 536 IPR033131 -
Ahy8g2143 695 PANTHER PECTINESTERASE 146 693 - -
Ahy8g2143 695 TIGRFAM PME_inhib: pectinesterase inhibitor domain 146 309 IPR006501 GO:0004857
Ahy8g2143 695 Pfam Pectinesterase 381 678 IPR000070 GO:0030599|GO:0042545
Ahy8g2143 695 CDD PMEI-like_3 156 310 - -
Ahy8g2143 695 PANTHER PECTINESTERASE 146 693 - -
Ahy8g2143 695 Gene3D - 378 695 IPR012334 -
Ahy8g2143 695 MobiDBLite consensus disorder prediction 98 151 - -
Ahy8g2143 695 Pfam Plant invertase/pectin methylesterase inhibitor 154 306 IPR006501 GO:0004857
Ahy8g2143 695 SUPERFAMILY Pectin lyase-like 378 692 IPR011050 -
Ahy8g2143 695 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 155 309 IPR035513 -
Ahy8g2143 695 MobiDBLite consensus disorder prediction 34 85 - -
Ahy8g2143 695 MobiDBLite consensus disorder prediction 28 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g2143 Ahy-Chr8 42865172 42870580 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g2143 110 693 Carbohydrate Esterase AT3G10720 57.119 0.0 682
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g2143 K01051 - gmx:100776781 833.172