Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g2115 ATGGCGCTATGGATGGAAAATCGTTCAGAGCCACTCACCGAAGCCGAGAAGGCAGACCTTGAAGCCATTGCTGCCATCAAAGAATCTGCAGCCATTGAACTCAAGGAAAAGGGTAACGAGTATGTGAAGAAGGGTAAGAAGCATTACTCTGAAGCAATTGATTGCTACACAAGGGCAATTAATCAGAAAGCATTGAATGATTCTGAGAGCTCTGTTCTTTTTGCGAACAGGGCGCATGTCAATTTGCTTCTTGGGAACCACCGGCGTGCCCTCTCTGATGCTCAACAAGCACTCAACTTGTCCCCCTCCAACATAAAGGCAATTTATAGAGCTGTCAAAGCATCTCTATCACTGAATTTATTGGCTGAAGCACAAGAGTATTGCCGAAAGGGTCTTAAGTTGGACCCCAATAATGAGGAACTTAAGAGGCTTGACCGACAGATTCGTACGAAGATATCTGAGAAGGAGAAGCTTGAGGCTGAAGTCTCTAGAGCCATATCGGAGGCAGAAGAACTTGTGTCTGCAATAGAAAATAGAGGATTGAAGATTGGAAAGGCAATGTATCGAGAACTCACCGGGTTAAAGAAACCGGTGTTAGACAAAAATAATATCCTTCATTGGCCTGTCCTTCTTCTGTATGCAGAGGTTATGTCCAGTGATTTCATTGAGGATTTCTGTGAGACTGACATGCTTTCAGTTCACCTTGATATCATGTTTTCAGCAGACCAACCACTCCCATGGGATGTTGAAAACAATTACAAACGTGATTTTGTTGAATTATACTATGAGGCTGGCTCTGGAGTTCGTCTATCAAAGGAGAAACTTCTTCATTGTTTATTAGAGGGAACTGCAGCTTCTCATGTTGATGATGAAGAGAAAGATGCGGTTGAGGATTTTAAACACACTGCAGGTTCCCCAAAATGGATCAAAGTAAATGAGAAGAAAACCCTCCAAGATATCCTCAAAGAGCCTAATTTCGTAATCCCCGAAATCCCAGTCTTCTATGTTGTTTCCAAGCAATCCAACTTTTATAGCAAGTTCAAATCTGGAAAATGGGCTCCTCCAAGCATATGA 1074 0.4255 MALWMENRSEPLTEAEKADLEAIAAIKESAAIELKEKGNEYVKKGKKHYSEAIDCYTRAINQKALNDSESSVLFANRAHVNLLLGNHRRALSDAQQALNLSPSNIKAIYRAVKASLSLNLLAEAQEYCRKGLKLDPNNEELKRLDRQIRTKISEKEKLEAEVSRAISEAEELVSAIENRGLKIGKAMYRELTGLKKPVLDKNNILHWPVLLLYAEVMSSDFIEDFCETDMLSVHLDIMFSADQPLPWDVENNYKRDFVELYYEAGSGVRLSKEKLLHCLLEGTAASHVDDEEKDAVEDFKHTAGSPKWIKVNEKKTLQDILKEPNFVIPEIPVFYVVSKQSNFYSKFKSGKWAPPSI* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g2115 357 ProSiteProfiles TPR repeat profile. 71 104 IPR019734 GO:0005515
Ahy8g2115 357 SUPERFAMILY TPR-like 22 158 IPR011990 GO:0005515
Ahy8g2115 357 Pfam Cns1/TTC4 Wheel domain 200 267 IPR044059 GO:0051879
Ahy8g2115 357 Pfam Tetratricopeptide repeat 106 138 IPR019734 GO:0005515
Ahy8g2115 357 SMART tpr_5 71 104 IPR019734 GO:0005515
Ahy8g2115 357 SMART tpr_5 31 66 IPR019734 GO:0005515
Ahy8g2115 357 SMART tpr_5 105 138 IPR019734 GO:0005515
Ahy8g2115 357 Coils Coil 141 179 - -
Ahy8g2115 357 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 4 1 353 - -
Ahy8g2115 357 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 4 1 353 - -
Ahy8g2115 357 Gene3D Tetratricopeptide repeat domain 24 180 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g2115 Ahy-Chr8 42198828 42202757 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g2115 30 160 Calmodulin-binding Proteins AT3G25230 31.690 2.31e-08 53.9