Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g2048 ATGGTGAAGGAGAAAAGCAAGAATAATGGGAGTAAGCAAAGGAAAGGGCTGTGGTCACCGGAGGAAGATGAGAAGCTGATAAGGTACATGATAACAAAGGGAGAAGGGTGTTGGAGTGACATTGCAAGAAATGCCGGCCTAGAGCGCTGCGGCAAGAGCTGCCGCCTTCGTTGGATAAACTACCTCCGACCCGACCTTAAACGCGGCGCCTTTTCTCTCCAAGAGGAAGACCTCATCATCCACTTGCACTCCATTCTTGGCAACAGATGGTCACAAATCGCGGCACGTCTACCTGGACGCACAGACAACGAAATCAAGAACTTCTGGAACTCCACGGTGAAGAAAAGGTTAAAACTGAACAACAACTCAACTTCATCACCAAACAACACTGACTCATCAGAGCCTAATAGCATCAGGGACAACAACGTTGTCATGGGGACAACAACTTCTAGTAATAACAACGGTATCATGCACATCAATGACCATCATCATCATCATCAGGATCTCATGACCATGTCCATGTGCATGGACAACTCATCCTCATCAACATCATCGTCTACCATGCATACTCATCACCATGCCATGGTCTTTGGGGATCCCTTTTCCATGGTAACCAACAACAACAATAATCATTATGAGATGGCGACCGGTGTAGCCGGTTTTCATGGCGCGATTGCCGGTGATCTGCCATTAGGAAATAGTTTTCATGGCGGCGATTATGGGGGGATGTTGGATGAAGAGAGTACTGATAAAATGGGGTTAGAAAGCGACTTGTCCCTTCCTCCATTAGAAAGTAGTATTAGAAGCACTGAAGAGATTATTATTATTAATAGCAACAATAATGCCTCCTCAATTGATGACATGAAAAGCCACAACAACCACTTCAATAATAATAATAATACTAATAATGATAGTTGCTTCAATAACACCGATAATCAGGTTCTGAATAACAACAACTGCTCCAATGAAGAGGATTTGTTTGGGTTTGGAAATCATGGCCAAGTGGAAAACTTAAGAATGGGAGAATGGGACTTTGAGGGTTTGATGCAAGACATTTCCTATTTTCCTTCCCTTGATTTCCAAGTTTGA 1089 0.4353 MVKEKSKNNGSKQRKGLWSPEEDEKLIRYMITKGEGCWSDIARNAGLERCGKSCRLRWINYLRPDLKRGAFSLQEEDLIIHLHSILGNRWSQIAARLPGRTDNEIKNFWNSTVKKRLKLNNNSTSSPNNTDSSEPNSIRDNNVVMGTTTSSNNNGIMHINDHHHHHQDLMTMSMCMDNSSSSTSSSTMHTHHHAMVFGDPFSMVTNNNNNHYEMATGVAGFHGAIAGDLPLGNSFHGGDYGGMLDEESTDKMGLESDLSLPPLESSIRSTEEIIIINSNNNASSIDDMKSHNNHFNNNNNTNNDSCFNNTDNQVLNNNNCSNEEDLFGFGNHGQVENLRMGEWDFEGLMQDISYFPSLDFQV* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g2048 362 MobiDBLite consensus disorder prediction 119 154 - -
Ahy8g2048 362 CDD SANT 18 62 IPR001005 -
Ahy8g2048 362 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Ahy8g2048 362 Pfam Myb-like DNA-binding domain 68 111 IPR001005 -
Ahy8g2048 362 Gene3D - 15 67 - -
Ahy8g2048 362 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Ahy8g2048 362 Gene3D - 69 142 - -
Ahy8g2048 362 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 62 IPR017930 -
Ahy8g2048 362 PANTHER MYB DOMAIN PROTEIN 55 8 362 - -
Ahy8g2048 362 PANTHER TRANSCRIPTION FACTOR MYB83 8 362 - -
Ahy8g2048 362 SUPERFAMILY Homeodomain-like 14 109 IPR009057 -
Ahy8g2048 362 CDD SANT 70 113 IPR001005 -
Ahy8g2048 362 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Ahy8g2048 362 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Ahy8g2048 362 SMART sant 14 64 IPR001005 -
Ahy8g2048 362 SMART sant 67 115 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g2048 Ahy-Chr8 40887142 40899402 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g2048 8 362 MYB Transcription Factor Family AT3G08500 45.257 4.03e-83 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy8g2048 Myb_DNA-binding 6.70E-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g2048 K09422 - gmx:100796379 325.865