Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g2029 ATGAGTGTTATGTATAGTCCTGTTCTCAAATACTCACATGGAGTTCTAAGAAAAGGCCATGAAATGATTTCAAATATTAACCATCATCAGCATCAGGATCAAAATCATCATCATCAACAACAACAGCAGCAAAATTCTAGATTATTGAGGTACCGTTCTGCTCCAAGTTCATTCTTGGAAAGCCTTGTTGATATTAACAATGGTGGTGCTAGTGTCAATGAGGACCCTACTCTGGGACATGGTTGTTACCATCATATTCCATCCACAAGCTCATCATCAGAGGCCATGTTTTCCAAGCCGATACAATCAAACAATGGATGGAGCCGCCGCGATTCGGAACCTGTGCAAGTCCAAGAAGAGTATGGAGGAAGCAACAACAAGCCTACTGTGTTGAAGGAGGAAACTGGGAATTCTTCTTTCTTAAAGGAACAAAATGGTTACTCTTATTGGTCTCAGCAAATTCAAAGTTTGCCAACAAATAATAATGGTTATGATGGCTCTTTTGGTGTAGTGAACTCTGTCAATTCAGATCACTCTACTCAATCTGAAATGGGTGTTAGGAGTTGCTCCAATCTCATCAGGCAAAAGAGTTCTCCAGCTGGATTTTTCTCCAGTGAAAATGCATTGAGAGAGGTTGAGAGGTTTAGATCCAATGATGTCTCATCTAATAGGTCATCCTCTTGCTTGAAAAGGATGCCACAGATTGCCGAATACGAAAACGAAAGTCATGAAGGAAACCTGGTAAATGATAATGGCAGCTCTAAGTACTATGTGCCTAGCTTCACCGGTGAAGTTTGGGACGCCTCTTCATTCAATTCCCAAAAAGCAGCAAGTGCAGATGAAATCATGTTCTCCGCTTCAACTGCTTTGGAATCTCAGGATTCAGACTTCTGCTCACAAAATCTTGGTTTGATTCATCATTTGAGTCTGCCTAGTTCTTCTACTAAGATGGGATCCATGGAGAAGTTTCTTCAACTCCAAGGAACCGTTCCATGCAAAATTCGAGCCAAAAGAGGCTTTGCCACTCACCCTAGAAGCATTGCAGAGAGGGTACGAAGAACACGAATTAGCGAAAGAATCAAGAAATTGCAAGGCCTTTTCCCGAAATCGGACAAGCAAACAAGCACAGCAGAGATGCTGGATTTGGCTGTTGAGCACATTAAAGAACTGCAGGAACAAGTTAAGATGCTCACAAATATTAGGTCAAAGTGTAGATGTACAAATACTCAGAAGCAATATTCTTGA 1245 0.4129 MSVMYSPVLKYSHGVLRKGHEMISNINHHQHQDQNHHHQQQQQQNSRLLRYRSAPSSFLESLVDINNGGASVNEDPTLGHGCYHHIPSTSSSSEAMFSKPIQSNNGWSRRDSEPVQVQEEYGGSNNKPTVLKEETGNSSFLKEQNGYSYWSQQIQSLPTNNNGYDGSFGVVNSVNSDHSTQSEMGVRSCSNLIRQKSSPAGFFSSENALREVERFRSNDVSSNRSSSCLKRMPQIAEYENESHEGNLVNDNGSSKYYVPSFTGEVWDASSFNSQKAASADEIMFSASTALESQDSDFCSQNLGLIHHLSLPSSSTKMGSMEKFLQLQGTVPCKIRAKRGFATHPRSIAERVRRTRISERIKKLQGLFPKSDKQTSTAEMLDLAVEHIKELQEQVKMLTNIRSKCRCTNTQKQYS* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g2029 414 Pfam Helix-loop-helix DNA-binding domain 345 391 IPR011598 GO:0046983
Ahy8g2029 414 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 340 390 IPR011598 GO:0046983
Ahy8g2029 414 MobiDBLite consensus disorder prediction 29 48 - -
Ahy8g2029 414 CDD bHLH_AtbHLH_like 345 397 IPR045239 -
Ahy8g2029 414 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 342 407 IPR036638 GO:0046983
Ahy8g2029 414 Coils Coil 380 400 - -
Ahy8g2029 414 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 37 410 - -
Ahy8g2029 414 Gene3D - 342 412 IPR036638 GO:0046983
Ahy8g2029 414 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 37 410 - -
Ahy8g2029 414 SMART finulus 346 396 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g2029 Ahy-Chr8 40449539 40452905 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g2029 30 408 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G51140 34.577 7.95e-47 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy8g2029 HLH 2.30E-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g2029 - - adu:107462676 766.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g2460 18 125573510 125577625 Ahy8g2029 8 40449539 40452905 hybridization