Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy8g2022 | ATGGCTACCTCTATGCTCTCACCACCGAACCTTCTGTCCCTGGCAGCCCCATCACCAAGTTCCTCGTCCTCAACCTTATACTTTAAACCCGCCACCCATCTCTCGCAGCCATTTTCTCTGAAGTTGGTGCCTTCTAAACGCAATCGGAGACCCTTTGCGGTGGCCGCAGAGGAAGCCGCGGTCACTACATCGGTGGACCCTAAATCGGAGGCTGCAAGGAGGCTCTATGTTGGCAACATTCCTCGTACTGTCACCAACGATGAGCTCAAGAACATCGTTGAAGAGCATGGCGCTGTTGAGAAAGCTGAGGTTATGTATGATAAATACTCTGGACGGAGTCGTCGCTTTGCATTTGTTACGATGAAAACTGTTGAGGATGCAAATGCAGTTGTTGAGAAACTTAATGGCACTGAAATCGGAGGACGTGAGGTCAAGGTAAATATAACCGAAAAACCTTTATCAACAGTAGATACATCTTTCCTTCAGGCCGAGGAGTCCAACTTTGTTGACAGCCCCCACAAGGTATATGTGGGAAATCTGGCCAAGACAGTAACATCAGATACGCTTAAAACTTTTTTCTCTGAGAAGGGAAAAGTTCTTAGCGCCAAGGTCTCACGGGTTCCGGGGACCTCAAAATCGAGTGGCTATGGTTTTGTTAGTTTTTCTTCTGATGAAGATGTTGAAGCAGCAATCTTGTCTTTCAACAATGCCTCACTAGAAGGGCAAAAAATTCGTGTGAATAAGGCTTAG | 750 | 0.468 | MATSMLSPPNLLSLAAPSPSSSSSTLYFKPATHLSQPFSLKLVPSKRNRRPFAVAAEEAAVTTSVDPKSEAARRLYVGNIPRTVTNDELKNIVEEHGAVEKAEVMYDKYSGRSRRFAFVTMKTVEDANAVVEKLNGTEIGGREVKVNITEKPLSTVDTSFLQAEESNFVDSPHKVYVGNLAKTVTSDTLKTFFSEKGKVLSAKVSRVPGTSKSSGYGFVSFSSDEDVEAAILSFNNASLEGQKIRVNKA* | 250 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy8g2022 | 249 | Gene3D | - | 157 | 249 | IPR012677 | - | |
Ahy8g2022 | 249 | PANTHER | 30S RIBOSOMAL PROTEIN 2, CHLOROPLASTIC | 29 | 249 | - | - | |
Ahy8g2022 | 249 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 73 | 151 | IPR000504 | GO:0003723 | |
Ahy8g2022 | 249 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
Ahy8g2022 | 249 | SMART | rrm1_1 | 74 | 147 | IPR000504 | GO:0003723 | |
Ahy8g2022 | 249 | SMART | rrm1_1 | 174 | 247 | IPR000504 | GO:0003723 | |
Ahy8g2022 | 249 | PANTHER | OS02G0815200 PROTEIN | 29 | 249 | - | - | |
Ahy8g2022 | 249 | CDD | RRM_HP0827_like | 74 | 151 | - | - | |
Ahy8g2022 | 249 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 173 | 249 | IPR000504 | GO:0003723 | |
Ahy8g2022 | 249 | SUPERFAMILY | RNA-binding domain, RBD | 67 | 151 | IPR035979 | GO:0003676 | |
Ahy8g2022 | 249 | SUPERFAMILY | RNA-binding domain, RBD | 169 | 249 | IPR035979 | GO:0003676 | |
Ahy8g2022 | 249 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 75 | 145 | IPR000504 | GO:0003723 | |
Ahy8g2022 | 249 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 175 | 245 | IPR000504 | GO:0003723 | |
Ahy8g2022 | 249 | Gene3D | - | 43 | 156 | IPR012677 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy8g2022 | Ahy-Chr8 | 40326984 | 40332665 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy8g2022 | 75 | 249 | Eukaryotic Initiation Factors Gene Family | AT2G23350 | 32.022 | 3.28e-17 | 79.0 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy8g2022 | K13126 | - | sind:105168752 | 330.872 |