Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g2019 ATGGGTCGCCCACCCAGCAATGGAGGCCCTGCCTTTCGCTTCACTTCATCTGAGGTTGCAGAAATGGAAACTATTTTGCATGAGCACAATAATGCAATGCCGGCACGCGATGTTCTTGCTGCTATTGCAGAGAAGTTCAGTGAATCACCGGGTCGTTGTAAAGACAAGATTACTGTTCAGATGAGACAAGTGTGGAATTGGTTTCAAAATAAGCGATATGCTATAAGGGCAAAATTAAACAAGTCTCTAGTAAAGTTAGATATCACACCAATGACCAAGGCCAGTTCAGCCGTGGTAAAGAATATTCATCAACCAACAGCCGCTACAATTCCAACTGCTTCAGGAAAAGTTACTCAAGAAAGCTCAGCCACGGAATTTGAAGCTAAATCTGGAAGGGATAGAGCATGGTATGACGTTGCTAACTTTATAATGCACAGATATTTGGAGAGCGGTGATCCGGAAGTGCTGGTAAGATTTTCTGGTTTTGGACCTGCGGAAGATGAGTGGGTAAATGTCCGAAAGAATGTCAGGCCACGCTCTCTGCCATGTGAATCAGCAGAATGTGTTGCAGTCCTTCCTGGGGATCTTATACTATGTTTTCAGGAAGGTAAAGAACAGGCCCTTTATTTTGATGCCCATGTACTTGATGCTCAAAGGCGGAGGCATGATGTAAGAGGTTGCCGTTGTAGATTTTTGGTTCGTTATGATCATGATCAGTCAGAGGAAATTGTGCAACTTAGGAAGATTTGTCGCAGGCCGGAAACCGATTTCAGGTTACAACAGCTTCATGCCGTGCCGGAGATGAAGAGTGGCATCGATCCAGCACCTGTTCATGCTGTCAGGGTTACTACTTCGGCCGAATCACAGAAACAACAGAATGCAAACACTCCAATGTCAACATTAGCACAAAGTATAAGTAAAGTCGAAACATCTAGTGATGTTACGGCAGGAAGCGTGTTCCCGGTCAGTGCTGCTACATTCGCAACCAACGTTGCTTCAAGCAGTGTTCATGGTGCCTCTAGTCACAGCATGGCCGAAGGAAAATAA 1047 0.4508 MGRPPSNGGPAFRFTSSEVAEMETILHEHNNAMPARDVLAAIAEKFSESPGRCKDKITVQMRQVWNWFQNKRYAIRAKLNKSLVKLDITPMTKASSAVVKNIHQPTAATIPTASGKVTQESSATEFEAKSGRDRAWYDVANFIMHRYLESGDPEVLVRFSGFGPAEDEWVNVRKNVRPRSLPCESAECVAVLPGDLILCFQEGKEQALYFDAHVLDAQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETDFRLQQLHAVPEMKSGIDPAPVHAVRVTTSAESQKQQNANTPMSTLAQSISKVETSSDVTAGSVFPVSAATFATNVASSSVHGASSHSMAEGK* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g2019 348 Pfam SAWADEE domain 124 250 IPR032001 GO:0003682
Ahy8g2019 348 ProSiteProfiles 'Homeobox' domain profile. 13 78 IPR001356 GO:0003677
Ahy8g2019 348 CDD homeodomain 13 76 IPR001356 GO:0003677
Ahy8g2019 348 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 1 324 IPR039276 -
Ahy8g2019 348 Gene3D - 10 85 - -
Ahy8g2019 348 SUPERFAMILY Homeodomain-like 4 78 IPR009057 -
Ahy8g2019 348 SMART HOX_1 7 82 IPR001356 GO:0003677
Ahy8g2019 348 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 1 324 - -
Ahy8g2019 348 Gene3D - 183 255 - -
Ahy8g2019 348 Gene3D - 121 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g2019 Ahy-Chr8 40284397 40288786 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Ahy8g2019 SAWADEE 2.00E-39 CL0049
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g2019 - - aip:107630217 443.736