Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g2000 ATGGCTGACATAGCAGGTTTACTTGAGGCAGCAGGATCAAGGTTCAGTGCATTGGAGCTTATTGGGCAGGGATCATTTGGTGATGTCTATAAAGGGTTTGACAGAGAGCTTAACAAAGAAGTTGCTATCAAAGTAATTGATTTGGAAGAATCGGAGGATGAAATTGATGATATTCAGAAGGAAATTTCTGTTCTGTCACAATGCCGATCTCCATACATCACTGAGTACTATGGTTCCTATCTCAATCAAACTAAACTCTGGATAATAATGGAATACATGGCTGGCGGCTCTGTCGCTGATCTACTTCAATCCGGTCCTCCACTGGATGAAACATCCATTGCTTGCATTCTACGTGACTTGCTACATGCAATTGATTACCTACACACTGAAGGAAAAATTCATAGAGACATTAAAGCTGCAAACATTTTATTGACCGAGAATGGTGATGTAAAGGTTGCAGATTTTGGTGTTTCTGCACAGCTCACGAGGACCATATCAAGGAGAAAGACATTTGTAGGAACACCTTTCTGGATGGCACCAGAGGTTATTCAGAATTCCGAAGGATATAATGAGAAGGCAGATATCTGGTCTATGGGGATCACTGCAATTGAGATGGCAAAAGGGGAGCCTCCACTTGCCGATCTTCATCCCATGAGAGTGCTTTTTATCATACCTCGAGAGAATCCTCCGCAGTTAGATGAGCATTTTTCTCGTCCCCTGAAAGAGTTCGTTTCATTGTGTTTGAAGAAGGTTCCTGCTGAGAGGCCAAGTGCTAAGGAACTTCTCAAACACCGTCTTATTCGGAATGCTAGGAAGAGTCCAAAGCTTGCAGAAAGAATAAGGGAGCGTCCAAAGTACCACATAAAGGATGATCCGGGGGCAGATGATCCGGGGACTGTTAAAAAAGTCCCAAGAGGGATGGGTGAGGCTTCTGATACTATGAAGGTGTCTAGAGATGTTAGAGCTGAAGAAACTAGTAGAACCAGTGGTCAGGGTCAAACTGTAAAAAGTGCTGGATGGGACTTCAACATTGGTGGGTCACAAGGCACTGTTCGTAGCGGTACTGTTCGTAGTGTAGCACGACCACCTGTTTCACAAAATCAGGTTACCCAAAGAAAAGCTCCGGAGAGTGGCTATCAAGGGGGAACTGTCAGTAGAAGTGCACTAAACGAGTCAGTTGAAAGTTCACTCGGAAAGGATCTTAGAGTTACATATCATGATGAGGATCCGGATGATCATCTTGAAGATGATGAAGGGAATGGGTCAGGAACTGTCGTAATTCGATCTCCAAAAGCATCAAGGCCATCAGTAGTTCGTGGCCAAAGCTCCCAGTCTAGCAGCAGCTATGCTTCTCTTGAAGATGCTTCTACCAGTGGAACTGTTGTCTTGCGTAACCAGAATGATGATTCTGATTCTTCACAAACACCTAGGTCCCGCAAGGGACTTAACGACAGAAATTCTATTACTTCACTGGAAGATAGTGCTGCAAATCTTGCTGAGGCAAAGGCTGCTATCCTAAGGAAAGCAAATGCTAAAGAGAGAAAATTCAACAATATACAAGAAAGCAAGAGAGACCAAATGGCAGGCAGTTCTGATTCTTCAAGATCACATCATGAATACCATGATCCTCAAAAGGGCATGTCAAGATCACAATATGCCAGTGATGATGAAGAGAGTGCTAAAGTTATGTCATCCTCTGTGCCATTATCAGTTTTGCTCGCTCCTTCACTAAAAGAGTCCATTGCTAATGATCCAGAAGGGGCAATCGTGCGAGCGGTTATCAGTTCTCTCGTAAACATGGAGGGCACAAGGCCAAGATCCTGCGATGTTCTTGTCAGAAAGTTGCTTCAGCGGTTGGCAAGTTCAAAGGAAGATTCATTGAAGGACCTGCAGGAACTAGCAGGCCAACTATTCAGCAAGACCAAGGGAGCCGGAGACACACGAAACACCGAAGCCGATAGCCGGAGGAAACAACAGAACAAGGACATCCATCAAAATAGCAATTTGAGCCCACTAGCCAGATTTCTTCTCTCAAGATGGCAGGGTCAAAGCTCACGTGATCTAAACCAATCTTAA 2076 0.4432 MADIAGLLEAAGSRFSALELIGQGSFGDVYKGFDRELNKEVAIKVIDLEESEDEIDDIQKEISVLSQCRSPYITEYYGSYLNQTKLWIIMEYMAGGSVADLLQSGPPLDETSIACILRDLLHAIDYLHTEGKIHRDIKAANILLTENGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQNSEGYNEKADIWSMGITAIEMAKGEPPLADLHPMRVLFIIPRENPPQLDEHFSRPLKEFVSLCLKKVPAERPSAKELLKHRLIRNARKSPKLAERIRERPKYHIKDDPGADDPGTVKKVPRGMGEASDTMKVSRDVRAEETSRTSGQGQTVKSAGWDFNIGGSQGTVRSGTVRSVARPPVSQNQVTQRKAPESGYQGGTVSRSALNESVESSLGKDLRVTYHDEDPDDHLEDDEGNGSGTVVIRSPKASRPSVVRGQSSQSSSSYASLEDASTSGTVVLRNQNDDSDSSQTPRSRKGLNDRNSITSLEDSAANLAEAKAAILRKANAKERKFNNIQESKRDQMAGSSDSSRSHHEYHDPQKGMSRSQYASDDEESAKVMSSSVPLSVLLAPSLKESIANDPEGAIVRAVISSLVNMEGTRPRSCDVLVRKLLQRLASSKEDSLKDLQELAGQLFSKTKGAGDTRNTEADSRRKQQNKDIHQNSNLSPLARFLLSRWQGQSSRDLNQS* 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g2000 691 SUPERFAMILY Protein kinase-like (PK-like) 12 268 IPR011009 -
Ahy8g2000 691 MobiDBLite consensus disorder prediction 273 487 - -
Ahy8g2000 691 MobiDBLite consensus disorder prediction 640 665 - -
Ahy8g2000 691 MobiDBLite consensus disorder prediction 435 487 - -
Ahy8g2000 691 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 1 689 - -
Ahy8g2000 691 ProSiteProfiles Protein kinase domain profile. 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy8g2000 691 MobiDBLite consensus disorder prediction 326 394 - -
Ahy8g2000 691 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Ahy8g2000 691 SMART serkin_6 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy8g2000 691 MobiDBLite consensus disorder prediction 515 561 - -
Ahy8g2000 691 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 689 - -
Ahy8g2000 691 MobiDBLite consensus disorder prediction 273 298 - -
Ahy8g2000 691 Pfam Protein kinase domain 16 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy8g2000 691 MobiDBLite consensus disorder prediction 528 556 - -
Ahy8g2000 691 Coils Coil 613 633 - -
Ahy8g2000 691 CDD STKc_MST3_like 13 286 - -
Ahy8g2000 691 Gene3D Transferase(Phosphotransferase) domain 1 12 302 - -
Ahy8g2000 691 Coils Coil 41 68 - -
Ahy8g2000 691 MobiDBLite consensus disorder prediction 646 662 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g2000 Ahy-Chr8 40026517 40035198 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g2000 1 688 MAP Kinase Kinase Kinase Kinase AT3G15220 62.429 0.0 800
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-YSK Ahy8g2000 Pkinase 8.70E-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g2000 K08838 - gmx:100815042 1038.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1386 18 26222043 26230722 Ahy8g2000 8 40026517 40035198 hybridization