Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1993 ATGGTCATGGAGCTTCTTGATCATCATGGTAGGCCTATAATAATCTGCCTCTTGTTGGTGATTGTGTTGTCAAGACCCTTACAAGGGTACAAATTCTATGTTGGTGGGAAAGATGGTTGGGTTCTGAATCCTTCTGAGAGTTACAACCAATGGGCGGAAAGGAACAGGTTCCAAGTCAGTGACACATTGGTGTTTAAGTACAAGGAGGGATCAGAGTCAGTGTTGGAGGTGAAGAAAGAAGACTATGAGAAATGCAACAAAAAGAAGGCAATAAAGAAACTAGAGGGGGGAGATAGTAGTGAGTTCCAATTTGATAGGTCAGGTCCATTCTACTTCATTAGTGGGAATGATGATAATTGTGAGAAAGGTCAGAAGCTTATTGTTGTGGTGTTAGCTCAAAGACCACCACCACCACCTCCTCAAAATACACCAAAATGTCCTCCTCCTTCACCAATTCATAATCCTCCCTATGTCACTCCACCACAAGCTCCTTCTCCCGGACATAACAATCATCATCCCAACCCTCCATATACCCCAATAGTTCCTCCAAAAACACCTTCACCAGAAGCACCCTCCCCTGGCCATACTCCAATAGTTACTCCAACACCACCACAAGCTCCTTCCCCTGGCCATACTCCAATTATTCCACCATACGTTACTCCAACTCCACCGCAATCTGCTCCTTCCCCCGGCCATAACAATCATCACCCTAACCCTCCATACACTCCAATAGTTCCACCACAAGCCGCACCTTCCCCCGGCCATAACAATCATCATCCTAACCCTCCATACACTCCAATTGTTCCACCATCACCTGGTAACACTCCATATGTTCCAACACCAAGATCATCACCTTCTCCATATGTACCAACGCCAATTTCTCAACCACCTTATCATACTCCAACTCCACCACAGGCTCCTTCCCCTGCTCATAACAATCATCACCCTAATCCTCCATATGTTCCATCACCAATTTCTCAAGCTCCTTCCCCTGCTACCAACAACAACCATCACCCAAACCCACCATATGCTCCACCAAACCCTCCAAAAACACCATCACCGCTTTCTCAGCCTCCCTATAGTGCTGCTGCTCCAACGCCAACATCATCACAACCACCATACAATACTTCCCCTGTTTCGCAACCTCCCACCGGCACGGGAACTGCACCCATAGGCTCACCACAGTACTCTCCAACAGCGCCATCACCTTCAGTTTCAACTCCATCACCGGCGTCTGCTACGCCATCACCACCCTCACCGTCACCCTCCATTTCTCCATCCGCTGCGACTCCTCTCGCTTCCCCATCTTCCTCTCCAGGAGCAGCAACTCCTGCAGCCACGCCGGCGTCGTCTTCGAACGAAACGACACCAGCAACGCCAAACGGGAAACCTTCGTCGTCTGGATGGGCTGCAAATCCATCACCAGTTTCGGTTAATTCAGCCATCGCCATTTTCGTCGCTGCCGCACTAAGCACTATTATTGCCTAG 1488 0.4899 MVMELLDHHGRPIIICLLLVIVLSRPLQGYKFYVGGKDGWVLNPSESYNQWAERNRFQVSDTLVFKYKEGSESVLEVKKEDYEKCNKKKAIKKLEGGDSSEFQFDRSGPFYFISGNDDNCEKGQKLIVVVLAQRPPPPPPQNTPKCPPPSPIHNPPYVTPPQAPSPGHNNHHPNPPYTPIVPPKTPSPEAPSPGHTPIVTPTPPQAPSPGHTPIIPPYVTPTPPQSAPSPGHNNHHPNPPYTPIVPPQAAPSPGHNNHHPNPPYTPIVPPSPGNTPYVPTPRSSPSPYVPTPISQPPYHTPTPPQAPSPAHNNHHPNPPYVPSPISQAPSPATNNNHHPNPPYAPPNPPKTPSPLSQPPYSAAAPTPTSSQPPYNTSPVSQPPTGTGTAPIGSPQYSPTAPSPSVSTPSPASATPSPPSPSPSISPSAATPLASPSSSPGAATPAATPASSSNETTPATPNGKPSSSGWAANPSPVSVNSAIAIFVAAALSTIIA* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1993 495 MobiDBLite consensus disorder prediction 426 474 - -
Ahy8g1993 495 ProSiteProfiles Phytocyanin domain profile. 30 132 IPR003245 GO:0009055
Ahy8g1993 495 PRINTS Proline rich extensin signature 178 195 - -
Ahy8g1993 495 PRINTS Proline rich extensin signature 197 222 - -
Ahy8g1993 495 PRINTS Proline rich extensin signature 128 149 - -
Ahy8g1993 495 PRINTS Proline rich extensin signature 149 165 - -
Ahy8g1993 495 MobiDBLite consensus disorder prediction 362 400 - -
Ahy8g1993 495 CDD OsENODL1_like 30 131 IPR041846 -
Ahy8g1993 495 PANTHER EARLY NODULIN-LIKE PROTEIN 2 15 318 - -
Ahy8g1993 495 PANTHER BLUE COPPER PROTEIN 15 318 IPR039391 GO:0009055
Ahy8g1993 495 MobiDBLite consensus disorder prediction 401 425 - -
Ahy8g1993 495 MobiDBLite consensus disorder prediction 335 361 - -
Ahy8g1993 495 MobiDBLite consensus disorder prediction 133 474 - -
Ahy8g1993 495 MobiDBLite consensus disorder prediction 133 250 - -
Ahy8g1993 495 Pfam Plastocyanin-like domain 40 124 IPR003245 GO:0009055
Ahy8g1993 495 MobiDBLite consensus disorder prediction 256 326 - -
Ahy8g1993 495 Gene3D - 29 134 IPR008972 -
Ahy8g1993 495 SUPERFAMILY Cupredoxins 29 132 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1993 Ahy-Chr8 39820842 39823073 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g1993 15 202 Phytocyanin Superfamily AT5G53870 45.729 1.14e-46 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1993 - - aip:107613132 476.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1372 18 25633867 25636106 Ahy8g1993 8 39820842 39823073 hybridization