Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1989 ATGGAGAATGGTGTTTGCATCCGACACTTCCTTAAGAAATTCGTAGAGTTTACCACCATCAATCAAAATGAATATCCAGTTTATAGACGTCGAGATGCTGATCATACCATTGAGGTTTCAGTTATCTTTGAAGATCAAGACAATTTGCAAGGAACTTTTGAGAAAGCAACAATTAAAGAATCCATGTTCATAGCTTGGTTTCAAGCAGACGCAAAATATGAGGCAACTAGACAATTAACTTATAACAGTTTTCAGATTGAATTTGTTTGGAAACACAACCTTAGAATATGGGAGCCTAGGGAAAAAAATACTGTTATTGGTAGATTATTCTTTGTCCTCCAACAGCAGGAGCATAAGAAAATTCATGGCCCAAGAAAAAAAGCAGGAAAAATCTCTACAAACATTTATAATGAAGTTGTTATCTTCTTAAGTAGAAAAAATCCTAGATTGTGGTGTGCTTTAAGTAAGGTAAGATGCCCGGCCGGTCATGGTTTGAGGTCACGCACCAGAGATTCGTTCTCTCGTCCATTTAGGAAGAAGGGTACTATTGCCCTCACTACCTACCTCAGGACCTACCATATCGGTGACTACGTCGACATCAAAGTCAATGGCGCTGTCCACAAGGGTATGCCTCACAAGTTCTACCATGGCCGCACAGGTCGTGTCTGGAACATCACGAAATGCGCCATTGGTGTTGAGGTCAACAAGCAGGTGGGGAACAGAATAATCAGGAAGAGAATTCATGTACGTGTGGAGCATGTTATGCCTTCCAGGTGCACGGAAGAGTTCCGCCTCAAGAAGATCAACAATGACAAACTTAAGACTGAGGCAAAGGCTAATGGACAACAAATCAGTACCAAGAGGCAGCCTGAGGGACCTAAACCTGGATTCATGGTTGAAGCTGCTACTTTAGAGACTGTCACTCCCATTCCATATGATGTTGTCAATGATCTTAAAGGAGGCTATTAG 969 0.4159 MENGVCIRHFLKKFVEFTTINQNEYPVYRRRDADHTIEVSVIFEDQDNLQGTFEKATIKESMFIAWFQADAKYEATRQLTYNSFQIEFVWKHNLRIWEPREKNTVIGRLFFVLQQQEHKKIHGPRKKAGKISTNIYNEVVIFLSRKNPRLWCALSKVRCPAGHGLRSRTRDSFSRPFRKKGTIALTTYLRTYHIGDYVDIKVNGAVHKGMPHKFYHGRTGRVWNITKCAIGVEVNKQVGNRIIRKRIHVRVEHVMPSRCTEEFRLKKINNDKLKTEAKANGQQISTKRQPEGPKPGFMVEAATLETVTPIPYDVVNDLKGGY* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1989 322 ProSitePatterns Ribosomal protein L21e signature. 195 220 IPR018259 GO:0003735|GO:0005840|GO:0006412
Ahy8g1989 322 PANTHER 60S RIBOSOMAL PROTEIN L21 160 322 IPR001147 GO:0003735|GO:0005840|GO:0006412
Ahy8g1989 322 MobiDBLite consensus disorder prediction 274 296 - -
Ahy8g1989 322 MobiDBLite consensus disorder prediction 275 289 - -
Ahy8g1989 322 SUPERFAMILY Translation proteins SH3-like domain 161 257 IPR008991 -
Ahy8g1989 322 PANTHER 60S RIBOSOMAL PROTEIN L21-1 160 322 - -
Ahy8g1989 322 Gene3D - 257 314 - -
Ahy8g1989 322 Gene3D Ribosomal protein L21 160 255 IPR036948 GO:0003735|GO:0005840|GO:0006412
Ahy8g1989 322 Pfam Ribosomal protein L21e 161 259 IPR001147 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1989 Ahy-Chr8 39773146 39781988 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g1989 160 322 Cytoplasmic Ribosomal Protein Gene Family AT1G09690 80.368 6.48e-99 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1989 K02889 - gmx:100305629 318.546