Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ahy8g1970 | ATGGCGGGGAAATCTCTAACCGGGTTTTGCTTCATCCTCCTCCTCCTCGTTGTTGCTCAGGAAATGGTGGTGCAAAGTGAGGCAGCAACGTGTGAGAACCTGGCGGATACCTACAGGGGACCATGCTTCACCACCGGAAGCTGCGACGACCACTGCAAGAACAAGGAGCACCTGCTCAGCGGCCGCTGCCGCGACGATTTCCGCTGTTGGTGCACCAGAAACTGTTAA | 228 | 0.5658 | MAGKSLTGFCFILLLLVVAQEMVVQSEAATCENLADTYRGPCFTTGSCDDHCKNKEHLLSGRCRDDFRCWCTRNC* | 76 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ahy8g1970 | 75 | PANTHER | DEFENSIN | 1 | 75 | - | - | |
| Ahy8g1970 | 75 | SMART | gth_4 | 30 | 75 | IPR003614 | GO:0006952 | |
| Ahy8g1970 | 75 | ProSitePatterns | Gamma-thionins family signature. | 29 | 52 | IPR008176 | GO:0006952 | |
| Ahy8g1970 | 75 | SUPERFAMILY | Scorpion toxin-like | 30 | 75 | IPR036574 | - | |
| Ahy8g1970 | 75 | PANTHER | DEFENSIN-LIKE PROTEIN 1 | 1 | 75 | - | - | |
| Ahy8g1970 | 75 | Pfam | Gamma-thionin family | 30 | 75 | - | - | |
| Ahy8g1970 | 75 | Gene3D | - | 29 | 75 | IPR036574 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Ahy8g1970 | Ahy-Chr8 | 39439814 | 39440785 | Dispersed/Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Ahy8g1970 | 11 | 75 | Plant Defensins Gene Families | AT2G02130 | 38.806 | 3.00e-09 | 47.0 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ahy8g1970 | - | K20670 | gmx:100779239 | 144.05 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Ahy18g1327 | 18 | 24348678 | 24349213 | Ahy8g1970 | 8 | 39439814 | 39440785 | hybridization |