Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1939 ATGGAGAGCACCGACTCGTCCACCGGTTCGCAACAACCGAACCTTCCACCGGGTTTCCGGTTCCACCCCACCGACGAGGAGCTCGTTGTTCACTACCTGAAGAAGAAAGCTGCATCAGCTCCTCTCCCAGTCGCCATCATCGCCGAGGTTGATCTCTACAAGTTCGATCCATGGGAGCTACCAGCTAAGGCAACGTTTGGGGAGCAAGAGTGGTACTTCTTTAGCCCAAGGGACAGGAAGTATCCGAACGGTGCTCGGCCAAACAGGGCGGCAACTTCCGGGTACTGGAAGGCAACCGGGACGGATAAGCCGGTGCTGACCTCCGGTGGGACCCAGAAGGTCGGCGTGAAGAAGGCTTTGGTCTTCTATGGAGGGAAGCCCCCCAGAGGGATAAAGACAAATTGGATCATGCATGAGTATAGACTTGCTGATAACAAACCTAACAATAGGCCTCCTGGTTGTGACTTGGGTAACAAGAAAAACTCTCTAAGGCTTGATGATTGGGTATTGTGCCGAATCTACAAGAAGAACAACACACATAGGTCTCCAATGGAACATGAGAGGGAAGATTCCATGGATGACATGATTGGAGGGATTCCTCCTTCCATCAACGTGGGCCAAATGAATGCAAGATTTCATCTCTCAAAAATGTCAACAAGCTTTAGCAACGCTTTGTTGGAAAACGACCATCACCATCACCAGAATCTTCTGGAAGGTATGATGCTAGGAGGAGGAACCAACAACAGCAATCCAAACATGTTGGGATTGGGATCAGCCTCAAACACCATTAACAATAATAGTAATAAGGCAGAGCTTTCATTTGTACCAACCATGACTACATCTTCAAACACCAAGAGGACTCTATCATCACTCTATTGGAATGAAGATGATGTTGCTGCTTCCAACAAAAGATTCAATTTGGAAAGTGGAGATCATAACCATGGAGAGAATAATGGTACTAGTGCTAGTTCTATTGCTACTCTGCTGAACCAACTTCCTCAAACCCCTTCATTGCACCAACACAACATCATGGGAACAATACCTTATCAAATTCAAGGAATGAATTGGTATGCTTAG 1077 0.4698 MESTDSSTGSQQPNLPPGFRFHPTDEELVVHYLKKKAASAPLPVAIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLTSGGTQKVGVKKALVFYGGKPPRGIKTNWIMHEYRLADNKPNNRPPGCDLGNKKNSLRLDDWVLCRIYKKNNTHRSPMEHEREDSMDDMIGGIPPSINVGQMNARFHLSKMSTSFSNALLENDHHHHQNLLEGMMLGGGTNNSNPNMLGLGSASNTINNNSNKAELSFVPTMTTSSNTKRTLSSLYWNEDDVAASNKRFNLESGDHNHGENNGTSASSIATLLNQLPQTPSLHQHNIMGTIPYQIQGMNWYA* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1939 358 PANTHER NAC TRANSCRIPTION FACTOR 56 1 339 - -
Ahy8g1939 358 MobiDBLite consensus disorder prediction 1 20 - -
Ahy8g1939 358 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
Ahy8g1939 358 SUPERFAMILY NAC domain 7 176 IPR036093 GO:0003677|GO:0006355
Ahy8g1939 358 ProSiteProfiles NAC domain profile. 15 176 IPR003441 GO:0003677|GO:0006355
Ahy8g1939 358 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 339 - -
Ahy8g1939 358 MobiDBLite consensus disorder prediction 1 17 - -
Ahy8g1939 358 Gene3D NAC domain 24 181 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1939 Ahy-Chr8 38775843 38778108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g1939 1 358 NAC Transcription Factor Family AT3G15510 53.488 9.82e-126 364
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Ahy8g1939 NAM 1.10E-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1939 - - gmx:100170710 582.022