Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1880 ATGCCTCTGAGATCTTCTTCATCTGATCTAATGGATCTTCTTCTATTTTGGAGTTTTCCAAACTCATCAGATATCTCAGATGATAAGCAGAACAATGATTCCAGCAAGAAGAAGCAAGCAGGCATCCTTGTTGGCTTTATATTGTTCATCATGATCATAATACTTGGACTGAAATTATTTCTATGGAGAAAAAAACTTGTGGAGACAGATATATTTTGGTCGAAGCAGCGTGATCACAAACGGGGAAAGGAAGATATGGACCTCCCAACATTTGATTTATCAACCATAGTTCATGCCACTGATCAATTTTCTAGCCGCAACGAATTGGGAAAAGGTGGATACGGACCAGTTTATAAGTATCAGGGCGTACTTACAAATGGAACCGAGATTGCGGTCAAGAGACTTTCCAAGAACTCCGACCAAGGATTGCAGGAGTTCAAAACGGAAGTTCAGCTAATTGCAAAACTTCAGCATCGCAACCTTGTAAAACTTCTTGGTTGTTGCATTCAGCAAGAAGAGAAACTTCTGATCTATGAGCTCATGCCCAACAGAAGTTTGGACTATTTTATTTTTGATGATGCTAGAAGAAAATTATTAGATTGGACCAAGCGCTTTCACATTATTAGTGGCACAGTTCGGGGTCTAGTTTATCTGCATCAGGACTCTAGACTAAGAATCATTCATAGAGATCTAAAAACTAGTAATATTCTTCTTGATGAAGACATGAATGCAAAAATATCAGACTTCGGTGTTGCTAGGACATTTGCTGCCGATCAAACTGAGGCCAAAACAAAAAGAGTGATGGGAACTCACGGTTATATTTCTCCTGAGTATGCGGTGCGTGGATCTTTCTCAATGAAGTCTGATGTGTTTGCCTTTGGTGTAATCATGCTTGAGGTAGTCAGTGGGAGGAAGAACAGAGATTTCCGTGTTCCTGACCAAAATCTTAACCTTCTTGGACATGCATGGGAGCTGTGGAATGAGGGGAAGGCTTTGGAGCTTGTAGATGAATCAGTGCGCGATTCGGTCATTGAAGTTGAAGCATTAAGATGTATACAGATAGGGCTGTTATGTGTGCAAGGGAGACCTGAAGATAGGCCTAACATGTCATCTGTAGTTCATATGTTGGATGACGATAAACCACTGCCTCGGCCGAGGCTGCCTGCATTTTATTCACACCAAGAAGACTCTTCATTAAGTAATCATACAATTTATTCAGCAAACGAGGTTACCATGTCATTGCTAGCAGCAAGATAG 1257 0.4081 MPLRSSSSDLMDLLLFWSFPNSSDISDDKQNNDSSKKKQAGILVGFILFIMIIILGLKLFLWRKKLVETDIFWSKQRDHKRGKEDMDLPTFDLSTIVHATDQFSSRNELGKGGYGPVYKYQGVLTNGTEIAVKRLSKNSDQGLQEFKTEVQLIAKLQHRNLVKLLGCCIQQEEKLLIYELMPNRSLDYFIFDDARRKLLDWTKRFHIISGTVRGLVYLHQDSRLRIIHRDLKTSNILLDEDMNAKISDFGVARTFAADQTEAKTKRVMGTHGYISPEYAVRGSFSMKSDVFAFGVIMLEVVSGRKNRDFRVPDQNLNLLGHAWELWNEGKALELVDESVRDSVIEVEALRCIQIGLLCVQGRPEDRPNMSSVVHMLDDDKPLPRPRLPAFYSHQEDSSLSNHTIYSANEVTMSLLAAR* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1880 418 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-1 27 402 - -
Ahy8g1880 418 SMART serkin_6 103 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy8g1880 418 ProSitePatterns Serine/Threonine protein kinases active-site signature. 226 238 IPR008271 GO:0004672|GO:0006468
Ahy8g1880 418 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 27 402 - -
Ahy8g1880 418 ProSiteProfiles Protein kinase domain profile. 103 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy8g1880 418 Gene3D Phosphorylase Kinase; domain 1 76 180 - -
Ahy8g1880 418 SUPERFAMILY Protein kinase-like (PK-like) 86 396 IPR011009 -
Ahy8g1880 418 Pfam Protein tyrosine and serine/threonine kinase 106 376 IPR001245 GO:0004672|GO:0006468
Ahy8g1880 418 CDD STKc_IRAK 109 377 - -
Ahy8g1880 418 Gene3D Transferase(Phosphotransferase) domain 1 181 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1880 Ahy-Chr8 37661387 37663993 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g1880 91 390 Receptor kinase-like Gene Family AT4G11530 57.285 5.95e-123 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy8g1880 PK_Tyr_Ser-Thr 3.90E-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1880 - - aip:107611884 609.757