Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1876 ATGGAAAAGTTCACCTTTCTTCTGTTGTGCTTCTTATTGCTGCATGATATAGCCGTTTCCACTGCCATAGAAAGCATTAGTATTACACGGTCCCTCACTGATGGTGACACCATGGTTTCAGCCGGTGGAACCTTTGCAGTTGGATTCTTAAGTATTCCAGAAAGTTCCAAGAACCGTTACCTTGGGATATGGTACAATAAAGTGCCATCTAACACAGTAGTATGGATTGCCAATAGAAACACTCCACTTAATGACTCGTCCGGGGTCTTGAAGTTCACTGGCAATGGAACTCTTGCTCTTCATACTCATAACGATACCATCATTTGGCATTCCAACTCATCAAGATTCGCGCAGCGACCAGTTGTTGCAGTGCTTTTGGAGTCAGGGAACCTGGTTGTGAAGGAAGATGGGAGCAATGATGATGATTTGAAGAGTTTCATTTGGCAGAGTTTTGATTACCCTTATGACACGCTACTGCCAGGGATGAAACTGGGAAGTGACTTAACTACAGGCCTTACCAGGTACCTAATATCGCAGATTAGTTCTGATGATCCTTCTGAAGGTAGCTATACTTATCAGCTTAATATTGTTGGATATCCTCAATTATGTATAAAAAATGGCCAATCCGTGACATATAGTAGTGGATCTTGGAACGGTCTTCGGTTTGGTGGAATTCCCCAGTTAAAACATAATACTTTTTACAACTTTTACTTTGTTTACAACAAGGAAGAGATATATTACACATATGAGCTTGTCAATAACGCTGTATATACAAGGTCCGTGCTATCTGCAGACGGATCAGTGAATCGTTATGTGTGGAGTGTTACGAATAAGAGCTGGAGTCCCTATCTAACAATACCAACTGATATCTGTGATTATTATGGTAAATGTGGAGCATATGGTATCTGTAATGTAGCCAATTCCCCTGTATGTAGTTGCTTATTGAACGGATTCGAACCTAAAGTCCCTGAAGAATGGAATCAGGCAGATTGGTCTAATGGTTGTGTTAGAATCAACAAATTGAGTTGCCAGGATGATGGATTTGTAAAGTTGTCTGGTTTAAAGTTACCAAACACACAAAGAGCATCATGGTTAAATAATAGCATGAGTCTTGATGAGTGTGCTAATCTATGCATGAAGAATTGTTCCTGCAAGGCTTATGCTGCTTTTGATATCAGGGAAGAAGGAAGAGGGTGTTTATTCTGGTATGATGAGCTGATAGATATTAGAGTGCTGAGTGATCCACAGCAAGATCTTTATGTCAGAATGTCAAGGAAAGATATAGATGAAATTAATAAGGCATCACATAAATCCAAGATCAGGAAGCTGCAGATTATTGCTTCCATCACAGTCATTTCTGTAGGAATTTTGATCCTATGCCTATCCTTCACCCTATACAGAAGAAAGAAGCAGCAGATAAACTATAGAAACATGAGAGACAGTCCAGAAAGATATGCACGTGTAATACAAGAGCATCAGGAGGAAGAACTAGAACTACCACTGTTTGATATGGCTACACTTATTGCTGCAACCAATAACTTCTCCACCAGTAACATATTAGGAAAAGGTGGTTTTGGAACTGTTTATCAGGGTATGCTGAAAGATGGAAGAGAAATAGCAGTTAAGAGGCTCTCAGTACATTCTAGACAAGGTCTTCAAGAGTTCAAAAGTGAAGTGTTGAATGTAGTCAAACTTCAGCATAGGAATTTGGTGAAGCTTCTAGGGTGTTGCATTCAAGCAGAAGAAAGAATGCTGGTCTATGAATATATGCCAAATAAAAGCTTGGACTACTTCATATTTGGTTAG 1806 0.3959 MEKFTFLLLCFLLLHDIAVSTAIESISITRSLTDGDTMVSAGGTFAVGFLSIPESSKNRYLGIWYNKVPSNTVVWIANRNTPLNDSSGVLKFTGNGTLALHTHNDTIIWHSNSSRFAQRPVVAVLLESGNLVVKEDGSNDDDLKSFIWQSFDYPYDTLLPGMKLGSDLTTGLTRYLISQISSDDPSEGSYTYQLNIVGYPQLCIKNGQSVTYSSGSWNGLRFGGIPQLKHNTFYNFYFVYNKEEIYYTYELVNNAVYTRSVLSADGSVNRYVWSVTNKSWSPYLTIPTDICDYYGKCGAYGICNVANSPVCSCLLNGFEPKVPEEWNQADWSNGCVRINKLSCQDDGFVKLSGLKLPNTQRASWLNNSMSLDECANLCMKNCSCKAYAAFDIREEGRGCLFWYDELIDIRVLSDPQQDLYVRMSRKDIDEINKASHKSKIRKLQIIASITVISVGILILCLSFTLYRRKKQQINYRNMRDSPERYARVIQEHQEEELELPLFDMATLIAATNNFSTSNILGKGGFGTVYQGMLKDGREIAVKRLSVHSRQGLQEFKSEVLNVVKLQHRNLVKLLGCCIQAEERMLVYEYMPNKSLDYFIFG* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1876 601 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 11 600 - -
Ahy8g1876 601 CDD B_lectin 29 154 IPR001480 -
Ahy8g1876 601 ProSiteProfiles PAN/Apple domain profile. 343 424 IPR003609 -
Ahy8g1876 601 SMART ntp_6 343 423 IPR003609 -
Ahy8g1876 601 PANTHER - 11 600 - -
Ahy8g1876 601 SUPERFAMILY Protein kinase-like (PK-like) 496 600 IPR011009 -
Ahy8g1876 601 Gene3D Hepatocyte Growth Factor 341 422 - -
Ahy8g1876 601 Gene3D Phosphorylase Kinase; domain 1 475 589 - -
Ahy8g1876 601 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 184 IPR036426 -
Ahy8g1876 601 Pfam Protein tyrosine and serine/threonine kinase 517 599 IPR001245 GO:0004672|GO:0006468
Ahy8g1876 601 ProSiteProfiles Protein kinase domain profile. 514 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy8g1876 601 CDD PAN_AP_plant 340 422 - -
Ahy8g1876 601 ProSiteProfiles Bulb-type lectin domain profile. 23 146 IPR001480 -
Ahy8g1876 601 ProSitePatterns Protein kinases ATP-binding region signature. 520 542 IPR017441 GO:0005524
Ahy8g1876 601 SMART blect_4 29 154 IPR001480 -
Ahy8g1876 601 Pfam D-mannose binding lectin 72 178 IPR001480 -
Ahy8g1876 601 Pfam S-locus glycoprotein domain 212 321 IPR000858 GO:0048544
Ahy8g1876 601 Pfam PAN-like domain 343 409 IPR003609 -
Ahy8g1876 601 Gene3D - 18 151 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1876 Ahy-Chr8 37614059 37616439 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g1876 429 600 Receptor kinase-like Gene Family AT4G23190 46.023 2.89e-37 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy8g1876 S_locus_glycop 5.50E-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1876 - - ahf:112705344 1211.05