Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1860 ATGATTAACCTATGTAAGAAAAATCATTTAAAGGAAGAACAGGAAGAGGATTTGGAGCTTCCTTTGTTTGACCTATCTAGTATAGTTAGTGCTACTGACAACTTTTCAATCAACAATAAGCTTGGAGAAGGTGGTTTTGGACCAGTATACAAGGGAACATTGGAAAATGGAGAAGAAATTGCTGTCAAGAGACTTTCTAGAGGCTCCAAACAAGGTGTCAAGGAATTTAAGACTGAAGTTGCGTTAATAGCTAAACTTCAACACCGTAATCTTGTAAAGCTTTATGGATCTTGCATTCAAGACCAAGAGAAATTGCTTATATATGAATATATGCCTAACAAAAGCTTAGATTTGTTCATATTTGAGCAAACCCAACGGATGCTGATGGATTGGTCTAAACGATTTCACATAATTTGCGGAATCGCTAAGGGTCTTCTTTATCTTCATCAAGATTCAAGACTCATAATTATTCATAGAGATCTTAAGACAAGCAACATATTGTTGGATAGTGAGATGAATCCTAAGATATCGGACTTCGGCTTGGCTAGAATTTTAGAGGTGGACCAAACCTCAAAAACTTCGCGCGTCGTTGGAACTTATGGATACATGGCACCAGAATATGCATTAGATGGAAACTTTTCGGTAAAATCAGATGTCTATAGTTTTGGTATTCTATTGTTGGAGATAATATCTGGAAAGAAAAATAAAGGAAACCATCGCCAGAAAGACGGTACAAACCTTATTGAATATGCATGGAATTTCTGGACAGAAGGAAGGCCCTTAGAATTGATTGATGAATATATGATAGACTATTGCAATATCTCTGAAGCGTTGCGATGCATCCAAATTGGTCTTTTGTGTGTGCAACAAAATCCACATGATAGACCAAACATATCATTTGTGGTTATGATGTTAGGTAGTGAAATTCAATTGCCTCTTCCAAAAGAACCAGCTCTTTTTGTTGGAAAGTATTCATGTCAGGAATATTCTTCTTCATGTATAAATGATGCACCTTCTGTTAATGAGTTAAGTATCTCAGATTTAGAAGCTCGTTAG 1056 0.3608 MINLCKKNHLKEEQEEDLELPLFDLSSIVSATDNFSINNKLGEGGFGPVYKGTLENGEEIAVKRLSRGSKQGVKEFKTEVALIAKLQHRNLVKLYGSCIQDQEKLLIYEYMPNKSLDLFIFEQTQRMLMDWSKRFHIICGIAKGLLYLHQDSRLIIIHRDLKTSNILLDSEMNPKISDFGLARILEVDQTSKTSRVVGTYGYMAPEYALDGNFSVKSDVYSFGILLLEIISGKKNKGNHRQKDGTNLIEYAWNFWTEGRPLELIDEYMIDYCNISEALRCIQIGLLCVQQNPHDRPNISFVVMMLGSEIQLPLPKEPALFVGKYSCQEYSSSCINDAPSVNELSISDLEAR* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1860 351 Pfam Protein tyrosine and serine/threonine kinase 36 301 IPR001245 GO:0004672|GO:0006468
Ahy8g1860 351 SUPERFAMILY Protein kinase-like (PK-like) 18 305 IPR011009 -
Ahy8g1860 351 CDD STKc_IRAK 41 305 - -
Ahy8g1860 351 ProSiteProfiles Protein kinase domain profile. 35 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy8g1860 351 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 6 344 - -
Ahy8g1860 351 Gene3D Transferase(Phosphotransferase) domain 1 111 311 - -
Ahy8g1860 351 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 6 344 - -
Ahy8g1860 351 ProSitePatterns Serine/Threonine protein kinases active-site signature. 156 168 IPR008271 GO:0004672|GO:0006468
Ahy8g1860 351 SMART serkin_6 35 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy8g1860 351 Gene3D Phosphorylase Kinase; domain 1 2 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1860 Ahy-Chr8 37287273 37288737 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g1860 23 351 Receptor kinase-like Gene Family AT4G23140 53.509 1.97e-128 381
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy8g1860 PK_Tyr_Ser-Thr 9.70E-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1860 - - adu:107462330 686.797