Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1858 ATGGAAGTGCTTCTTTCTTTGATCCTATTCAATCTTCATCTCCTTCTTCTTGTTCTTCTTCCTTTCACCTACACCAGTGTCTCAGCTGATTCTTCCTCTGGGTTGAAAAATGACACCATGTGTGACTATTACAGATTTTGTGGAGCAAATGGGAACTGTGATCTTACAAACCCAAAACTATGCGTGTGTTTAGATGGTTTCACACCAAAGGACCCAACTTCCTATGATTCCTCAGACTTCAAAATGGGATGTGTTAAGAACAAAGCATGGAATTGCAGCACTGATGTGTTTGTTGGATACTCTGTGCTTCATGAACCAAATGGAACTTCTTCTTTGTTGAACCAACAAAGCTTGGGAGGTGAAGATTGCAAGGGAAAGTGCTCTAGTGATTGTTCTTGCATGGCTTATACTATAATTGGGAGTGGTTGCAAATTGTGGAGTGGTGATTTGTTTGATGTTAGGTTCGTTAAGGAAGGAGGTCAAGGTATCTATATTAGAACACCAGCTTCGGATAAAGGGGAAAAGGGTGGTGGAGGGGGAAATCAAGGTAAAAATGAGGGATTGGTGGTAGGAATAGTTGTTGGGAGCACGATAATTGTGATTTCAGGGATGATTCTGGCTTCTTGTTGCTTTCTCAGGAAGAGAACACAGTCAAAAGCATTGGGACATGTAAGGATAAATGAGATGGTTAGTTATCAAACTCATACCAATGAACAAAAGGAAGATCTGGGGCTTCCATTATTTGATCTGAAAAGAATAGCTGTGGCCACTGATAATTTCTCCCCCAACAATAAGCTTGGAGAAGGCGGTTTTGGCCCCGTATACAAGGGTATACTAGATGATGGGCGACAAATTGCTGTGAAGAGGCTTTCGAGTAGTTCTGGTCAAGGCCTACATGAGTTCAAAACGGAAGTAAAACTAATAGCTAAACTTCAACACCGAAATCTTGTAAAGCTTTTCGGATGTTGCATCCAAGAAAAGGAGAAACTACTCATTTACGAATACATGCCTAACAGAAGTTTGGACTATTTTATTTTTGATCAAACACAAGGGAATGTTTTGGATTGGCCTAAGCGCTTTAATATCATTCGTGGGATTGCTAGAGGCTTGCTCTATCTTCATCAAGATTCAAGGTTGAGAATTATACATAGAGATCTTAAAGCAAGTAATGTTCTGTTAGATAATAAGTTGGACCCCAAGATATCAGACTTTGGTTTAGCTAGAAGTTTTGGAGGGGATCAGAGTAACGCAAATACAAACAGAGTTGTCGGAACTTTCGGATATATGGCTCCAGAATATGCTGTTAATGGACAATTTTCAGTCAAATCTGATGTCTTTAGCTTCGGAGTTTTAATAATTGAAATCGTATCCGGAAAGAGAAATAGAAAGTTTTATTATTCAAACAACAACGATAGCCTATATGGGCATGCATGGGATTTATGGAAGCAAGGAAGGTCACTAGAGCTTGTAGATGAAAGCCTCAAAGATTCATGGAATTTGAGTGAAGTAGAACGTTGTATCCACATTGGTCTCCTTTGTGCACAACAATATCCCCATGATAGGCCAACCATGTCTTCTGTGGTTCTAATGTTGGGAAGTGATTTTGATTTGCCTCTACCTGAAATTCCTACATTTTTCATTGTTGAACCTTTTGATGCTTCAAGCTCCTCCACTGGTAAAAATGACTTGAGCATTACAGAGATGGAAGCTCGATGA 1716 0.3969 MEVLLSLILFNLHLLLLVLLPFTYTSVSADSSSGLKNDTMCDYYRFCGANGNCDLTNPKLCVCLDGFTPKDPTSYDSSDFKMGCVKNKAWNCSTDVFVGYSVLHEPNGTSSLLNQQSLGGEDCKGKCSSDCSCMAYTIIGSGCKLWSGDLFDVRFVKEGGQGIYIRTPASDKGEKGGGGGNQGKNEGLVVGIVVGSTIIVISGMILASCCFLRKRTQSKALGHVRINEMVSYQTHTNEQKEDLGLPLFDLKRIAVATDNFSPNNKLGEGGFGPVYKGILDDGRQIAVKRLSSSSGQGLHEFKTEVKLIAKLQHRNLVKLFGCCIQEKEKLLIYEYMPNRSLDYFIFDQTQGNVLDWPKRFNIIRGIARGLLYLHQDSRLRIIHRDLKASNVLLDNKLDPKISDFGLARSFGGDQSNANTNRVVGTFGYMAPEYAVNGQFSVKSDVFSFGVLIIEIVSGKRNRKFYYSNNNDSLYGHAWDLWKQGRSLELVDESLKDSWNLSEVERCIHIGLLCAQQYPHDRPTMSSVVLMLGSDFDLPLPEIPTFFIVEPFDASSSSTGKNDLSITEMEAR* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1858 571 ProSiteProfiles PAN/Apple domain profile. 92 168 IPR003609 -
Ahy8g1858 571 Pfam S-locus glycoprotein domain 38 70 IPR000858 GO:0048544
Ahy8g1858 571 SMART serkin_6 260 531 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy8g1858 571 Gene3D Phosphorylase Kinase; domain 1 220 335 - -
Ahy8g1858 571 SUPERFAMILY Protein kinase-like (PK-like) 244 554 IPR011009 -
Ahy8g1858 571 SMART ntp_6 92 167 IPR003609 -
Ahy8g1858 571 Pfam PAN-like domain 92 153 IPR003609 -
Ahy8g1858 571 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 33 565 - -
Ahy8g1858 571 ProSiteProfiles Protein kinase domain profile. 260 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy8g1858 571 Pfam Protein tyrosine and serine/threonine kinase 263 529 IPR001245 GO:0004672|GO:0006468
Ahy8g1858 571 Gene3D Transferase(Phosphotransferase) domain 1 336 536 - -
Ahy8g1858 571 CDD PAN_AP_plant 80 168 - -
Ahy8g1858 571 ProSitePatterns Serine/Threonine protein kinases active-site signature. 381 393 IPR008271 GO:0004672|GO:0006468
Ahy8g1858 571 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 33 565 - -
Ahy8g1858 571 CDD STKc_IRAK 266 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1858 Ahy-Chr8 37264251 37267622 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g1858 180 545 Receptor kinase-like Gene Family AT4G23230 53.406 5.35e-129 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy8g1858 PK_Tyr_Ser-Thr 1.00E-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1858 - - aip:107610641 1087.4