Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1853 ATGTCCCATCCTGCGGTCTGGAATTGGAACTCATCACAACACCGAAAAAATAAAACGCAGATGATGGAAGTGGTTCTGAGTTTGATGCTAATTAGCAGTGCTAATTTTCTATTAACTGAAGAGAGCCAAAACGACAGCGTATCATCCTCTTCTGGAGGAAACGAAAGCTACTGCGACTTCCCTGGAATTTGCGGACCCAATGGAAACTGCGATGTTAATAAGCCGCTAGCTTGTGGATGCTTGGATGGTTTCACACCCAAGTCTCCCACTGCCTTCGATAGCCTCGACTACACGCACGGCTGCGTCAGAAAGAAACCATTCAATTGTAGCACCGACGTCTTCGTTGCCTATGCTGTGTTCCAAGAACCCACTGGCACGTCTTATTATCATTCTTTCTTCAACCAAAGTTTGAAAGCCGAGGGTTGCAAGGAGAAATGCAAGAGTAACTGTTCTTGCATGGCGGCTTATACAGAAATTGAGAGTGGTGAATGCAAATTGTGGAGTGGTGATTTGTTTGACGTTAGGGTCATACAGGAAGGACGCCAATATCTTTATATTCGAATGCCTGCTTTTGACCAAGCAGAGCCCGGAGGCCGAAGTCACCGGCGCAGCGACCATAAGGTGGTGGGAGTAGTTGTTGGCAGTGCTGCTGTTGTGATTTTGGGTATGATCTTGGCTTCTTGGTACATGCTCACCAAAAAAACAGAGCCACAAGCATTGGGAGAAGTAAGGATTGGTGAGATGCTTAGTCAGACCAATGAACAAGAAGGGGATCTGGAGCTTCCATTACTTGACCTATCAAGAATAGCTATGGCTACTGATAACTTTTCTCTCAATAACAAGCTTGGAGAAGGTGGTTTTGGACCTGTATACAAGGGCGTATTAGATGATGGACAACAAATTGCTGTAAAGAGACTTTCAAGAAGTTCTGGACAGGGTTTAAATGAATTTAAAACTGAGGTCAAACTAATAGCCAAACTTCGACACCGTAATCTTGTAAAACTTCTTGGTTGTTGCATTCATGAGGAAGAGAAATTGTTGGTATATGAATACATGCCTAACAGAAGTTTAGACTATTTTATTTTTGATCAAATGCGAAAGAAGACTTTGGATTGGCCTAAGCGCTTTAACATCATTTGTGGAATTGCTAGGGGCTTATTATATCTTCATCAAGATTCAAGACTAAGGATTATACATAGAGATCTTAAAGTAAGTAATGTTCTATTAGATAGTAAAATGAACCCAAAGATTTCAGATTTCGGTTTAGCTAGAAGTTTTGGAGGGGATCAAAGTAAAGGAAATACACATAGAGTAGTGGGAACTGTTGGATACATGGCACCTGAATATGCTGTTCATGGAAATTTTTCGGTAAAATCTGATGTCTTTAGTTTCGGTATTTTGCTACTCGAGATAATATCAGGAAGAAAAAATAGAAGATTTTATTATCCAAGTTCCAATGTCAACCTATATGGACATGCATGGGATCTATGGAAACAAGGAAGGTCATTAGAATTGGTGGATGAATGGTTGAAGGAGACATGGAATGTGTCTGAAGTGCAACGTTGCATCCACATCAGCCTCCTATGTGCACAACAGCATCCCCAAGATAGGCCAACCATGTCATCAGTGGTTCTCATGCTTGGAACTGAAATTGATTTACCTCAACCCAAATATCCTACGTTTTTTGTTGCTGAATCTTCTGAAGGCACAAGTTCCTCCTCTTGTAAAAACGAATTGAGCGTTACAGAATTGGAACCTCGATAA 1764 0.4133 MSHPAVWNWNSSQHRKNKTQMMEVVLSLMLISSANFLLTEESQNDSVSSSSGGNESYCDFPGICGPNGNCDVNKPLACGCLDGFTPKSPTAFDSLDYTHGCVRKKPFNCSTDVFVAYAVFQEPTGTSYYHSFFNQSLKAEGCKEKCKSNCSCMAAYTEIESGECKLWSGDLFDVRVIQEGRQYLYIRMPAFDQAEPGGRSHRRSDHKVVGVVVGSAAVVILGMILASWYMLTKKTEPQALGEVRIGEMLSQTNEQEGDLELPLLDLSRIAMATDNFSLNNKLGEGGFGPVYKGVLDDGQQIAVKRLSRSSGQGLNEFKTEVKLIAKLRHRNLVKLLGCCIHEEEKLLVYEYMPNRSLDYFIFDQMRKKTLDWPKRFNIICGIARGLLYLHQDSRLRIIHRDLKVSNVLLDSKMNPKISDFGLARSFGGDQSKGNTHRVVGTVGYMAPEYAVHGNFSVKSDVFSFGILLLEIISGRKNRRFYYPSSNVNLYGHAWDLWKQGRSLELVDEWLKETWNVSEVQRCIHISLLCAQQHPQDRPTMSSVVLMLGTEIDLPQPKYPTFFVAESSEGTSSSSCKNELSVTELEPR* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1853 587 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 16 580 - -
Ahy8g1853 587 Pfam PAN-like domain 109 174 IPR003609 -
Ahy8g1853 587 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 16 580 - -
Ahy8g1853 587 SMART ntp_6 109 188 IPR003609 -
Ahy8g1853 587 Gene3D Phosphorylase Kinase; domain 1 242 351 - -
Ahy8g1853 587 ProSitePatterns Serine/Threonine protein kinases active-site signature. 397 409 IPR008271 GO:0004672|GO:0006468
Ahy8g1853 587 Pfam S-locus glycoprotein domain 46 88 IPR000858 GO:0048544
Ahy8g1853 587 CDD PAN_AP_plant 140 189 - -
Ahy8g1853 587 Gene3D Transferase(Phosphotransferase) domain 1 352 554 - -
Ahy8g1853 587 ProSiteProfiles PAN/Apple domain profile. 109 190 IPR003609 -
Ahy8g1853 587 Pfam Protein tyrosine and serine/threonine kinase 277 545 IPR001245 GO:0004672|GO:0006468
Ahy8g1853 587 SUPERFAMILY Protein kinase-like (PK-like) 261 566 IPR011009 -
Ahy8g1853 587 SMART serkin_6 276 547 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy8g1853 587 ProSiteProfiles Protein kinase domain profile. 276 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy8g1853 587 MobiDBLite consensus disorder prediction 567 587 - -
Ahy8g1853 587 CDD STKc_IRAK 282 547 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1853 Ahy-Chr8 37199455 37202732 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g1853 264 563 Receptor kinase-like Gene Family AT4G23230 60.133 4.90e-127 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy8g1853 PK_Tyr_Ser-Thr 7.00E-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1853 - - adu:107462470 1167.14