Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1842 ATGGCAGAAGATCAATTTCAGGCAAGTGGAAACTGGTGGGAGAATCCAGCTATTAGGAACAATTGGCAACCGCATCACCAACAACAAGATGAATCAGATCACATGATGAAACCGACAAGGGTTTCCATGGATTCCTCGGGTGGTGGCGGTGCCGGTGGCGGTTCGTCTTCTGTGGTGTTTCATGACCCACAGAAGCTTCAGCCTCCGGATTCCGCCACGGCCGCCACTTCTTCCACTGACCCCAACTTGCACTTTATGGCTTTAGGCCTCTCTTCCCCGCCCATCGATTGGAATCAACAACCATCCTTCTTGCGTGGTGAGAAGGGTGGAGAGAACAGCTTCAGGTCGATGCTACAAGAAGAGGGTGGCGGCGGCGGCGGCATGGGGTTGTCACCACAACAAGTCCATCAATGGAGATCACCGGAAACCGAATTCAAGAACAATAGAGGTTTCTGTTTGGAGCAAAACCAATTCAGTCCTCAATATAGCTCCGGTGACAGCACAGTAACAAGCCAACAAGGATTTCATCACCAAAACATGGATCATTCCGCAGTTCTATACGGTAGCCCTTCATCAATCTTACAAGGACTATTAGGACCTGATCATCATCACCATCATCATCAACAACAAGCTAATCATAATTTTTCATATCCAACTTCAAACTATGGGTTGAGTTCTTCTAGTAGCAATGACTTTGTGCCTTCTTCTTCTTCTTCTAATTGGTCTAATAACAACAATAATAATAATAATAACAATAAAGTGCCTCAGTTCTTGAGAGGCTCACCACCAAAACAGTTATCGAATTCGTCATCATCACCGATAACAACAACAAACACTAGTTTGCATTTCACAAACAACGCTCCTTTTTGGAACGCTGCTGCTGCTGCTGCTTCTGACCCGAAAGATGTTAGGTCCACCACCTTCTTCCCTAATTCATTGCAGCCACCATTCTTCACTAATCCAAGTTTTGATGTCCAATCTAAGAATATGAGTGAAATGAGGGATTCAGGTGCAGTGGTGAAGAAAAGTGGGAGTGAACCAACACCCAAAAGGCCTCGGAACGAAACTACCCCATCTCCTTTGCCAGCTTTTAAGGTGAGAAAAGAGAAGATGGGGGACAGAATCACTGCACTCCAACAATTAGTGTCGCCTTTTGGAAAGACTGATACAGCCTCAGTGTTATCTGAAGCAATTGAATACATCAAATTCCTCCATGAACAGGTCACTGTTTTGAGTACCCCGTATATGAAAAGTGGAGCTCCTATACAGATTCAACAGGGTTCCGGTAAATCTAAGGAAGGTGAGGGTCCAAAACAAGATCTTAGAAGCCGAGGGCTATGCTTGGTGCCAGTTTCAAGCACATTTCCAATGACTCATGAAACCACAGTTGATTTTTGGACACCAACATTTGGAGGAGGTTCAAGATAG 1428 0.451 MAEDQFQASGNWWENPAIRNNWQPHHQQQDESDHMMKPTRVSMDSSGGGGAGGGSSSVVFHDPQKLQPPDSATAATSSTDPNLHFMALGLSSPPIDWNQQPSFLRGEKGGENSFRSMLQEEGGGGGGMGLSPQQVHQWRSPETEFKNNRGFCLEQNQFSPQYSSGDSTVTSQQGFHHQNMDHSAVLYGSPSSILQGLLGPDHHHHHHQQQANHNFSYPTSNYGLSSSSSNDFVPSSSSSNWSNNNNNNNNNNKVPQFLRGSPPKQLSNSSSSPITTTNTSLHFTNNAPFWNAAAAAASDPKDVRSTTFFPNSLQPPFFTNPSFDVQSKNMSEMRDSGAVVKKSGSEPTPKRPRNETTPSPLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVTVLSTPYMKSGAPIQIQQGSGKSKEGEGPKQDLRSRGLCLVPVSSTFPMTHETTVDFWTPTFGGGSR* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1842 475 MobiDBLite consensus disorder prediction 1 25 - -
Ahy8g1842 475 MobiDBLite consensus disorder prediction 1 79 - -
Ahy8g1842 475 MobiDBLite consensus disorder prediction 322 361 - -
Ahy8g1842 475 Gene3D - 365 420 IPR036638 GO:0046983
Ahy8g1842 475 PANTHER TRANSCRIPTION FACTOR BHLH123-LIKE ISOFORM X1 51 463 - -
Ahy8g1842 475 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 355 404 IPR011598 GO:0046983
Ahy8g1842 475 MobiDBLite consensus disorder prediction 211 279 - -
Ahy8g1842 475 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 51 463 - -
Ahy8g1842 475 MobiDBLite consensus disorder prediction 196 279 - -
Ahy8g1842 475 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 365 420 IPR036638 GO:0046983
Ahy8g1842 475 CDD bHLH_AtbHLH_like 361 412 IPR045239 -
Ahy8g1842 475 SMART finulus 366 410 IPR011598 GO:0046983
Ahy8g1842 475 MobiDBLite consensus disorder prediction 421 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1842 Ahy-Chr8 37024346 37028839 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g1842 105 475 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 43.765 6.15e-70 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1842 - - ahf:112772433 812.372
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1140 18 17890312 17894933 Ahy8g1842 8 37024346 37028839 hybridization