Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1839 GCTTCGAAACCACCGTCGCCGGCCTCGCCTTCTGCCTCCGTCGCGCAGCCACTGTCTCGACGGTGCCAGTTCTGTTCCATCGCGTCAGCCCTTCGGTCGTGCCCTGTTCCTTTCTTGCTACTGATCTGCTCTGCTCTGTTCTGGCATTTAGTTCTAGGGAAATTGATTATCATCGCTAACAACTGCCCACCATTGAGGAAGTCAGAAATAGAGTACTATGCCATGTTGGCAAAGGTTGGAGTCCATCATTACGATGGGAACAATGTCGACTTGGGCACTGCATGTGGAAAATATTACAGAGTGTGCTGCCTCAGCATTATTGATCCTGGTGATTCTGATATCATTAAGACACTGCCTGGCGAACAGTAA 369 0.5014 ASKPPSPASPSASVAQPLSRRCQFCSIASALRSCPVPFLLLICSALFWHLVLGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYDGNNVDLGTACGKYYRVCCLSIIDPGDSDIIKTLPGEQ* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1839 122 PANTHER RIBOSOMAL PROTEIN L30 53 122 IPR039109 GO:0003723
Ahy8g1839 122 PANTHER 60S RIBOSOMAL PROTEIN L30 53 122 - -
Ahy8g1839 122 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 54 115 IPR004038 -
Ahy8g1839 122 Gene3D - 50 118 IPR029064 -
Ahy8g1839 122 ProSitePatterns Ribosomal protein L30e signature 2. 90 110 IPR022991 -
Ahy8g1839 122 SUPERFAMILY L30e-like 54 116 IPR029064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1839 Ahy-Chr8 36972017 36974481 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g1839 53 122 Cytoplasmic Ribosomal Protein Gene Family AT3G18740 85.714 1.73e-43 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1839 K02908 - gmx:100793713 149.443