Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1838 ATGAGAATGGATCTTACACAACAAGGATTAAAGGTAGAGAATGCAACGGTTGGGCCTTTAGGGTCTGCACTTTTTGACTCTGCTGTTTCCATTTTTTCTGCTCATAATAAGTATGCATTTCCTTTGGATGGGAAATTGATTATCATCGCTAACAACTGCCCACCATTGAGGAAGTCAGAAATAGAGTACTATGCCATGTTGGCAAAGGTTGGAGTCCATCATTACGATGGGAACAATGTCGACTTGGGCACTGCATGTGGAAAATATTACAGAGTGTGCTGCCTCAGCATTATTGATCCTGGTGATTCTGATATCATTAAGACACTGCCTGGCGAACAGTAA 342 0.4181 MRMDLTQQGLKVENATVGPLGSALFDSAVSIFSAHNKYAFPLDGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYDGNNVDLGTACGKYYRVCCLSIIDPGDSDIIKTLPGEQ* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1838 113 PANTHER 60S RIBOSOMAL PROTEIN L30 43 113 - -
Ahy8g1838 113 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 45 106 IPR004038 -
Ahy8g1838 113 ProSitePatterns Ribosomal protein L30e signature 2. 81 101 IPR022991 -
Ahy8g1838 113 PANTHER RIBOSOMAL PROTEIN L30 43 113 IPR039109 GO:0003723
Ahy8g1838 113 SUPERFAMILY L30e-like 45 107 IPR029064 -
Ahy8g1838 113 Gene3D - 30 109 IPR029064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1838 Ahy-Chr8 36962526 36964146 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g1838 44 113 Cytoplasmic Ribosomal Protein Gene Family AT3G18740 85.714 1.75e-43 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1838 K02908 - gmx:100499680 149.443