Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1819 ATGGATTCACAACAGCTATATAGTTTTGGTGTGACAAGTGCAGGACTACCTTATATTCCATCCTTCCCCACAATTCCGTCGTCGCAACCCAACAGGCTTCTTGGATCCTTGAAATTTGACACTGGGAACTCGCCCAATTCGCCCTTTTCGACTCATTTTGATTCTGATACTCTTTCAGCCTTTAGTGATAGCCAGGACCAGCAGCACAGCCCTGGAGAAATCCTATCCGGCGTCAGCACCTCGTGCAACTCGCCTTTCGAAACCAACCATTACTTGCATACATCAGTCTCGTCTGCAGACAGTAATAGGGGCAGTTTTCAACTCTATTCTGCCAGGAGCTCTCTTCTGCAGAATGCAAATTGTAACCAGAAAATTCGAAACGTGTTGCTGGAATTAGAATCTGCTCTGATGGCCCCGGACGAAGAAGAAGTCACTACATCGAATGCTTCCATGGTTGAGAGCAGTGGACCAACAACATCTGGCCAAAGAAACAGGTCATGGAGTCATGATCATTACGGCTCGCAATTTGTTCAGAGCCAGGGATCATATGTAACTGGAAGCAGGCAAACAAGTGAGTTTGAACATGTTATGAAGCGCCAGAAATCGATAGTGGAAGCATCATCGCCCCCAGGTTACCCCTCGGGAAATTTGAAACAATTGCTGGTTGCTTGTGCAGAGGCCATGGCTGATGGCAACATGAATGATTTTGATCAATTGATATCAAAGGCTAAAGGTGCTGTATCTATAACCGGTGAGCCATTGCAACGGCTCGGTGCTTACATGGTAGAAGGGCTGGTTGCTAGGAAGGAAGCATCAGGGACCGGCATCTATCGCGCCCTTAAGTGCAGAGAGCCGGAAGGCAAAGACTTACTTTCATACATGCAAATGCTGTTTGAAATCTGTCCCTATCTGAAATTTGGTTACATGGCAGCCAATGGAGCCATAGCCGAAGCGTGCCGAGATGAGGATCACATACACATAATAGACTTTCAGATTGCTCAAGGAACTCAATGGATGACTCTCCTCCAAGCTCTCGCCGCGAGACCTCGAGGACCTCCCCATGTGAGGATCACAGGGATTGATGACCCTGTTTCCAGGTATGCTCGTGGCGAAGGACTAGAGGTAGTTGGGAAAAGGCTGGCCATGATGTCTGAGAAATTTCGCATCCCGGTGGAGTTTCATGGAGTGCCGGTTTATGCTCCGGATGTGACCAGAGACATGCTAAATATCAGGTCCGGAGAGGCTTTGGCTGTGAACTTTCCTTTGCAACTTCACCATACTGCTGATGAGAGTGTTGATGTGAATAACCCAAGAGATGGAATCCTTAGACTGGTGAAGTCGCTTTCGCCCAAGGTGGTAACATTGGTGGAGCAGGAATCAAACACAAACACAACACCATTTTTCAACAGATTCATGGAGACCTTGGACTACTACTTGGCGATCTTCGAGTCTATTGATGTCACACTCCCAAGAAACAGCAAGGAGAGGATCAATGTGGAGCAGCATTGTCTGGCCAGGGATATTGTCAACATTGTGGCTTGTGAAGGGAAGGAAAGGGTCGAGCGCCACGAACTCTTCGGCAAGTGGAAGTCGAGGTTGACTATGGCCGGATTCCGGCAGTGTCCTTTGAGCTCCTATGTGAATTCTGTTATAAGAAGCCTTCTCAGGTGCTATTCTGAACACTATTCCTTGGTGGAGAAGGACGGAGCCATGTTGTTGGCATGGAAGAACAGAAATTTGATATCAGCTTCAGCATGGCACTGA 1764 0.4779 MDSQQLYSFGVTSAGLPYIPSFPTIPSSQPNRLLGSLKFDTGNSPNSPFSTHFDSDTLSAFSDSQDQQHSPGEILSGVSTSCNSPFETNHYLHTSVSSADSNRGSFQLYSARSSLLQNANCNQKIRNVLLELESALMAPDEEEVTTSNASMVESSGPTTSGQRNRSWSHDHYGSQFVQSQGSYVTGSRQTSEFEHVMKRQKSIVEASSPPGYPSGNLKQLLVACAEAMADGNMNDFDQLISKAKGAVSITGEPLQRLGAYMVEGLVARKEASGTGIYRALKCREPEGKDLLSYMQMLFEICPYLKFGYMAANGAIAEACRDEDHIHIIDFQIAQGTQWMTLLQALAARPRGPPHVRITGIDDPVSRYARGEGLEVVGKRLAMMSEKFRIPVEFHGVPVYAPDVTRDMLNIRSGEALAVNFPLQLHHTADESVDVNNPRDGILRLVKSLSPKVVTLVEQESNTNTTPFFNRFMETLDYYLAIFESIDVTLPRNSKERINVEQHCLARDIVNIVACEGKERVERHELFGKWKSRLTMAGFRQCPLSSYVNSVIRSLLRCYSEHYSLVEKDGAMLLAWKNRNLISASAWH* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1819 587 Pfam GRAS domain family 217 586 IPR005202 -
Ahy8g1819 587 ProSiteProfiles GRAS family profile. 208 587 IPR005202 -
Ahy8g1819 587 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 22 587 - -
Ahy8g1819 587 MobiDBLite consensus disorder prediction 45 79 - -
Ahy8g1819 587 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 22 587 IPR005202 -
Ahy8g1819 587 MobiDBLite consensus disorder prediction 141 169 - -
Ahy8g1819 587 MobiDBLite consensus disorder prediction 140 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1819 Ahy-Chr8 36449675 36452733 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g1819 215 586 GRAS Transcription Factor Family AT1G50600 61.022 4.10e-170 492
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Ahy8g1819 GRAS 1.30E-128 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1819 - - adu:107462432 1176.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1086 18 16275970 16279015 Ahy8g1819 8 36449675 36452733 hybridization
Ahy8g1819 8 36449675 36452733 Ahy13g1749 13 27776148 27779405 PCT
Ahy13g1749 13 27776148 27779405 Ahy8g1819 8 36449675 36452733 PCT