Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1715 ATGGAAATTACACAACAACACAACACCACTACCAAACATAAAGCTGCTGCTGCTGCTTCTTCTTCTTCAACAACTTCACCTTATTATTATTCCAAGATTGGTTTTGCTGCTTCATCAGAGAGGAGTAGTGGTGTTGGAGGTGGGTATGCTTCATCTTCTTCACTGGTTTTGGATAGGGTGAAGGGTGAGTTGGTTGAAGCACCTGTGAAATTAGAGCGCAAGGGTGTGTTCCCTGAGAGAACCATTGAAGCTTTGAAGAACCACAGTGAAGCTGAGAGGAGGAGAAGAGCTAGAATCAATGCTCACCTTGATACACTCAGAACTGTCATCCCTGCTGCTAACAAGATGGACAAAGCATCATTACTGGCTGAGGTTATTAGACATCTGAAGGAGCTGAAAACGAATGCAGCACAAGCATGTCAAGGCCTAATGATACCAAAGGACAATGATGAATTAAGAGTTGAAGAACAAGAAGGTGGATTGAATGGCTTCCCTTATTCAATAAGAGCATCTCTATGCTGCGAATACAAACCCGGCTTGTTATCTGATATAAGACAAGCACTTGATGCCCTTCACCTTATGATAATAAGTGCAGAGATCGCGACGTTAGGAGGCAGGATGAAGAATGTGTTTGTGATAATCAGCTGTGAAGAACAGAGCTTTGAAGATGCTGAGTATAGGCAGTTCCTGGCCGGATCGGTTCACCAAGCTCTTAGGTCTGTTCTTGATAGATTTTCTGTTTCACAGGACATCTTAGAGTCTAGAAAGAGGAGGAGAATTTCTATATTCAGTTCATCATCCTTGGAAGATTTTTTGTAA 819 0.4237 MEITQQHNTTTKHKAAAAASSSSTTSPYYYSKIGFAASSERSSGVGGGYASSSSLVLDRVKGELVEAPVKLERKGVFPERTIEALKNHSEAERRRRARINAHLDTLRTVIPAANKMDKASLLAEVIRHLKELKTNAAQACQGLMIPKDNDELRVEEQEGGLNGFPYSIRASLCCEYKPGLLSDIRQALDALHLMIISAEIATLGGRMKNVFVIISCEEQSFEDAEYRQFLAGSVHQALRSVLDRFSVSQDILESRKRRRISIFSSSSLEDFL* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1715 272 Gene3D - 79 140 IPR036638 GO:0046983
Ahy8g1715 272 SMART finulus 89 138 IPR011598 GO:0046983
Ahy8g1715 272 Pfam Helix-loop-helix DNA-binding domain 87 132 IPR011598 GO:0046983
Ahy8g1715 272 MobiDBLite consensus disorder prediction 1 25 - -
Ahy8g1715 272 SUPERFAMILY ACT-like 171 248 IPR045865 -
Ahy8g1715 272 PANTHER TRANSCRIPTION FACTOR BHLH30 41 272 IPR045847 GO:0003700|GO:0006355
Ahy8g1715 272 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 85 138 IPR036638 GO:0046983
Ahy8g1715 272 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 83 132 IPR011598 GO:0046983
Ahy8g1715 272 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 41 272 - -
Ahy8g1715 272 ProSiteProfiles ACT domain profile. 169 254 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1715 Ahy-Chr8 34885939 34888502 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g1715 70 261 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 40.306 1.63e-32 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy8g1715 HLH 3.10E-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1715 - - lja:Lj3g3v2848980.1 374.015