Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1689 ATGGATGATGGAGAAGTTTCAAATGCTGCTTTCCCTCTTCATCACAACAACCAAACTCATCATCCAACTTCTAACAATCCTCCACCTTTGAAAAGGAAGAGAAACCTACCTGGAAACCCAGATCCTGAAGCTGAAGTGATAGCCTTATCACCCAAGACTCTGATGGCGACAAACAGGTTCGTGTGTGAGATTTGCCTAAAGGGTTTCCAAAGGGATCAGAATCTTCAACTCCATAGAAGAGGACACAACCTTCCATGGAAGCTGAAGCAGAGAACAACAAAAGAAGTAAGGAAGAGAGTGTACGTGTGCCCGGAGAAAAGCTGCGTCCATAACCACCCTTCAAGGGCCTTAGGAGACTTAACAGGGATCAAGAAGCACTTTTGCAGAAAGCATGGGGAGAAGAAGTGGAAGTGTGACAAGTGCTCAAAGCGTTATGCTGTACAATCAGATTGGAAAGCACACTCCAAAACCTGTGGTACCAGGGAATACAAATGTGACTGTGGAACCATCTTTTCACGGAGGGACAGTTTCATCACACACAGGGCTTTCTGTGATGCCTTAGCAGAAGAAACAGCAAGGGTAAACGCAGCATCAACCATAAACCACACATTATTAGGTGCTAACAACATTGCTTACACCCTCATGCAGCAGCAAAATCATCATCCTTTGGTTCCTAATAACATGTCAACCCATTTCTCTTCAATTTTCAAGCCAATTTCTTCATCCACTACTGATGAAATAAGCAGCAATAGCCAAACATCTTCTAGACCCTTATCCCTTTGGAACATGGGTCATCACCCTCATGACACAACAACAATAATGCCAATTACTCACAACAATTTGCATGATATTCATCACCAAATTGGATTTGCTACAAACCCTCCTCCACCATCAATTTGGATGTTTGGAAACAAACATCCCTCCAATGGAAGCCAGCAAGAGATAATAACTAGCACTACAAGTGCTAATTCACTTCCATTAATGAACATTGTCAAGAATAATAATAATAACAATAATAGTAATAATAATAACAATAATAATCATGTTGCAAACCAGCTTGTAAGTGTTCCTTCGTTGTATAGCACCCAACACCAATCCCATGATCATGATCAAACAGCAACAACATCTTCATCAGCAGCAAACATGTCAGCCACAGCTTTATTGCAAAAAGCGGCTCAAATTGGATCAACTTCTTCAACTGATCCATCATCATTTCTTGGGAGCATAGGTTTGAAATGCAGTAACAATAATAACCAAGGGCAAGATGGGAATAACAAATTTTGTGGGATTTACAGTTCAAGTTGGAGTGAGCCAGAGAGCTCTACTGGTGATTTGACACAAATGCCCCCTACAAAAAGAATGCGTGTGCAGAATGAAGATGGCAGTGCAGGGGGACAAACTAGGGATTTTCTTGGTGTTGGCGTGCAAACCATTTGCCACCCTTCATCTATCACTGGCTGGATTTGA 1467 0.4179 MDDGEVSNAAFPLHHNNQTHHPTSNNPPPLKRKRNLPGNPDPEAEVIALSPKTLMATNRFVCEICLKGFQRDQNLQLHRRGHNLPWKLKQRTTKEVRKRVYVCPEKSCVHNHPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYKCDCGTIFSRRDSFITHRAFCDALAEETARVNAASTINHTLLGANNIAYTLMQQQNHHPLVPNNMSTHFSSIFKPISSSTTDEISSNSQTSSRPLSLWNMGHHPHDTTTIMPITHNNLHDIHHQIGFATNPPPPSIWMFGNKHPSNGSQQEIITSTTSANSLPLMNIVKNNNNNNNSNNNNNNNHVANQLVSVPSLYSTQHQSHDHDQTATTSSSAANMSATALLQKAAQIGSTSSTDPSSFLGSIGLKCSNNNNQGQDGNNKFCGIYSSSWSEPESSTGDLTQMPPTKRMRVQNEDGSAGGQTRDFLGVGVQTICHPSSITGWI* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1689 488 PANTHER F-BOX ASSOCIATED PROTEIN 17 479 - -
Ahy8g1689 488 MobiDBLite consensus disorder prediction 11 30 - -
Ahy8g1689 488 ProSiteProfiles Zinc finger C2H2 type domain profile. 60 82 IPR013087 -
Ahy8g1689 488 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 17 479 - -
Ahy8g1689 488 ProSitePatterns Zinc finger C2H2 type domain signature. 62 82 IPR013087 -
Ahy8g1689 488 Gene3D Classic Zinc Finger 93 184 - -
Ahy8g1689 488 SUPERFAMILY beta-beta-alpha zinc fingers 59 156 IPR036236 -
Ahy8g1689 488 MobiDBLite consensus disorder prediction 1 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1689 Ahy-Chr8 34478783 34481915 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g1689 24 488 IDZ Gene Family AT1G03840 51.976 1.72e-145 424
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Ahy8g1689 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1689 K25870 - gmx:100778666 545.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0941 18 11914176 11917216 Ahy8g1689 8 34478783 34481915 hybridization