Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1687 ATGCAAGAGGAAATAATGACTCAGTGCAACAGTAATAATGATTACCCTGAAAACAATCATAGCACCATTGTGGAGAGGAACAAAGATAGCTTAATTAGTAGAACTTGTCCATCATGTGGTCATCATATCAAATGCCAACAAGACCACCAGGGTGCTGGAATTCACGATTTACCTGGGCTACCAGCTGGAGTGAAGTTTGATCCAACAGATCAGGAAATTCTAGAACATTTGGAAGCCAAGGTGAGGTCTGATATTCACAAGCTTCACCCCTTAATTGATGAGTTTATCCCTACTCTTGAAGGCGAGAATGGAATCTGCTGCACCCATCCAGAAAAGTTACCAGGAGTAGGCAAAGATGGGTTGATCCGTCACTTCTTTCACCGGCCATCGAAAGCATACACAACAGGAACAAGGAAAAGAAGAAAGGTTCACATTGATGCTGATGGCAGTGAAACAAGGTGGCACAAAACAGGTAAAACTAGACCAGTCTACATCAGTGGCAAGTTGAAAGGTTACAAGAAAATCCTTGTTCTTTACACCAACTACAAGAAGCAAAGGAAGCCTGAGAAAACAAACTGGGTCATGCACCAGTACCACCTTGGCAACAATGAAGAGGAGAAGGAAGGTGAGTTAGTTGTGTCTAAGGTTTTCTACCAGACACAACCTAGACAATGTGCAGGTTCACTACTCATCAAAGATTCATCATCATTCCCTGCTAAACTAAAGGATCAAAGTGGTGTTCATCATCATGAAGTGACTAATAATCATAAGAACAATGGGTTTGTGGAATACTACAATGCATCCTTTATAAGCTTTGCTCAAGGGGAACAACAACATAGGTCAAACAATCCCACATTGATTTCCCATTTTCCTGCTCATGATGGGGCTCCTTTCATTCCTTGA 903 0.4175 MQEEIMTQCNSNNDYPENNHSTIVERNKDSLISRTCPSCGHHIKCQQDHQGAGIHDLPGLPAGVKFDPTDQEILEHLEAKVRSDIHKLHPLIDEFIPTLEGENGICCTHPEKLPGVGKDGLIRHFFHRPSKAYTTGTRKRRKVHIDADGSETRWHKTGKTRPVYISGKLKGYKKILVLYTNYKKQRKPEKTNWVMHQYHLGNNEEEKEGELVVSKVFYQTQPRQCAGSLLIKDSSSFPAKLKDQSGVHHHEVTNNHKNNGFVEYYNASFISFAQGEQQHRSNNPTLISHFPAHDGAPFIP* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1687 300 Gene3D NAC domain 69 223 IPR036093 GO:0003677|GO:0006355
Ahy8g1687 300 Pfam No apical meristem (NAM) protein 61 200 IPR003441 GO:0003677|GO:0006355
Ahy8g1687 300 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 6 299 - -
Ahy8g1687 300 SUPERFAMILY NAC domain 55 219 IPR036093 GO:0003677|GO:0006355
Ahy8g1687 300 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 6 299 IPR044799 GO:0003700
Ahy8g1687 300 ProSiteProfiles NAC domain profile. 60 219 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1687 Ahy-Chr8 34472714 34475032 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g1687 6 300 NAC Transcription Factor Family AT4G28500 59.740 4.84e-117 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Ahy8g1687 NAM 6.30E-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1687 - - gmx:100791648 486.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0939 18 11907943 11910112 Ahy8g1687 8 34472714 34475032 hybridization