Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1667 ATGGACCGGGGTGGTGGTGAAGACGCGCCGCTAGAGGCGAAGAGGGAGCCTAAGCCGGATGAAGATCATAATAATAATAATAAGAAGAAGAAGAAGAAAGAAGTGCCGGTGACATGGGTTAGCGGGAAGAAAGGTTCCGGTGGTGGCATGCGGTGTTGTCAAGCTGAGAAGTGCAAGGCGGATCTTGAGGAGGCAAGGCAGTACCATAGGAGGCACAGGGTGTGTGAGTACCATGCCAAGGCTCAGGTGGTTCTTGTTTCCGGCATTAGACAACGCTTCTGTCAGCAATGTAGCAGGTTCCATGAGATAGGTGAATTTGATGACACAAAAAGAAGTTGCCGGAGGCGTTTGGCCGGACACAACCAACGGCGAAGAAAGAACTGTGATTCTCAAGCAGAAGGGTCGAGGCGCAAAGGGATATGTCCTCGGTTGAAGAAGGACACTGCCTGTGGAGATGATAGGAGCAGAATTCAGATTGCAATCCAAGAGAGTGGAGCTTATAAACATTTCCAGATAAGATGA 522 0.4981 MDRGGGEDAPLEAKREPKPDEDHNNNNKKKKKKEVPVTWVSGKKGSGGGMRCCQAEKCKADLEEARQYHRRHRVCEYHAKAQVVLVSGIRQRFCQQCSRFHEIGEFDDTKRSCRRRLAGHNQRRRKNCDSQAEGSRRKGICPRLKKDTACGDDRSRIQIAIQESGAYKHFQIR* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1667 173 Gene3D - 44 114 IPR036893 GO:0003677|GO:0005634
Ahy8g1667 173 MobiDBLite consensus disorder prediction 1 41 - -
Ahy8g1667 173 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 35 173 IPR044817 GO:0003677
Ahy8g1667 173 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 35 173 - -
Ahy8g1667 173 Pfam SBP domain 53 126 IPR004333 GO:0003677
Ahy8g1667 173 MobiDBLite consensus disorder prediction 1 38 - -
Ahy8g1667 173 ProSiteProfiles Zinc finger SBP-type profile. 50 127 IPR004333 GO:0003677
Ahy8g1667 173 SUPERFAMILY SBT domain 51 130 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1667 Ahy-Chr8 34167674 34168935 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g1667 40 159 SBP-box Gene Family AT1G53160 55.200 4.77e-41 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Ahy8g1667 SBP 7.20E-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1667 - - ccaj:109810441 213.001
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0917 18 11463805 11465055 Ahy8g1667 8 34167674 34168935 hybridization