Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1656 ATGGCTCATCAGCAGAGAGGTCAAGCTTCTTCTTCAACCAAAATGGAAAGGAAGATCATAGAGAGAAACAGAAGAGAACAAATGAAGAACCTTTGTTTCACGCTCAATTCTCTTCTCCCTAACTTCAACCCCAAGCAAACATTGCCACCACGTGTTGACCAAATAGATGAGGCCATCATCTACATCAAAACCCTAGAATCAAGGGTTGAGATTGCTAAGGAGAAGAAAGAAAGCTTATTAAACAAGGGAATGAAGAAGAGACCTCATGATTTAGCAGGTAGCAGTGCCTTTGATGATGAAACTCAAGGAACAAGCCTAAAACCCCCAACTATTGAGATTCATGAACGTGGTTCCATGTTAGAGATAGTTCTTATGATTTCTGGCTTTGATAACCAATTCATCTTCAGTGAAATTATTCGCATATTGCATGAAGAGAATATTGAGGTCCTTAGTGCAATTTCTTCTCGCGCTGGAGATTCAATGATTCATGTTGTGCACGCAGAGAATCATCTCTATCAATTAGGAGCAACGAAAGAAATAAGTGAGAGATTAAAAAGGTTTGTGGACGCACATCGTTTGCAGGACATTCAAGGGGCCCAGGGGCCATAA 609 0.4072 MAHQQRGQASSSTKMERKIIERNRREQMKNLCFTLNSLLPNFNPKQTLPPRVDQIDEAIIYIKTLESRVEIAKEKKESLLNKGMKKRPHDLAGSSAFDDETQGTSLKPPTIEIHERGSMLEIVLMISGFDNQFIFSEIIRILHEENIEVLSAISSRAGDSMIHVVHAENHLYQLGATKEISERLKRFVDAHRLQDIQGAQGP* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1656 202 MobiDBLite consensus disorder prediction 85 108 - -
Ahy8g1656 202 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 8 194 - -
Ahy8g1656 202 SMART finulus 18 71 IPR011598 GO:0046983
Ahy8g1656 202 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 12 82 IPR036638 GO:0046983
Ahy8g1656 202 Coils Coil 62 82 - -
Ahy8g1656 202 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 12 65 IPR011598 GO:0046983
Ahy8g1656 202 Pfam Helix-loop-helix DNA-binding domain 14 66 IPR011598 GO:0046983
Ahy8g1656 202 Gene3D - 4 92 IPR036638 GO:0046983
Ahy8g1656 202 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 8 194 IPR015660 GO:0003700|GO:0006357
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1656 Ahy-Chr8 33909034 33910948 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g1656 2 190 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 36.458 2.23e-26 98.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy8g1656 HLH 1.20E-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1656 - - gmx:100805461 186.422
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0897 18 10956054 10957895 Ahy8g1656 8 33909034 33910948 hybridization
Ahy8g1656 8 33909034 33910948 Ahy13g1568 13 22642235 22643746 PCT
Ahy13g1568 13 22642235 22643746 Ahy8g1656 8 33909034 33910948 PCT