Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1627 ATGGATGAAGCTAGTAATAATAATAATAAGAACAGCAACAGTGGCAGCAGGTTCAGGAACATGGGTGTGGATGATGACAGTGATGCACACAAGGTTTTTGATGAAATGAATGATCCAACCTTCTTTCAGAGGGCTCAATGGAAGCCAGTTTTTGATGAAGCTTCCGTCTTACATAACAGACCTCTCAAGAAGATTCGAAGCCCTCAACGTTCTTCTTCTTCTTCCCCTCAACAACCTCTTCCTTCTCCTTCTTCTTCTTCCTCCTCTGTTCCTCCATCTTCACAATCATCCAGAATAGTGTTTCCTTTTGCGTTTGATCCCTCACAACAGAACCCCATGCAAATGCCGTTCTCTTACCAATACGGAACAAGAACAGATACCCCTTTCATGCACCCACCAATGCAACCAACAACGCACAACAACCAAATGATTTCTTTCGCTTCTCAATCTCATCATCCGCAACAGCAAAATAACATGAACATGATGAACACAGTGTATCAACCGCAAATGCTACAACAACAGAATCAGCAGCAGATTCTTCAGTATTGGAGCGAAGCACTGAACCTAAGTCCAAGAGGGAGAATGATGATGATGAACAACAGGTTGAGGCCACCGTCGCAGCCGTTGAACACGACGAAGCTTTATAGAGGTGTGAGGCAACGCCATTGGGGGAAATGGGTAGCTGAGATTCGTCTACCTCGAAACAGAACTCGACTCTGGCTCGGCACCTTCGACACTGCAGAAGATGCTGCCATGGCCTATGATCGCGAGGCCTTCAAGCTTAGAGGTGAGAATGCACGCCTCAACTTCCCTGAACTCTTCCTCAACAAAAAGGATGATGATAATAATGATAAGAATCAAGAAGAAGCACCTTCTGATGCTCCTACTACTTCATCTCCTTCCTCTTCTATTACAACAACAAAGCAAGTTGAAGAGGTTTCTGAAGGAGGGAATGCGAATGTGGAGAAGAGTCCCATAGAAGAGGGTAATGAGAATTCAAGAAGTGTGAGTGAAGGGGTTTCTCAAGAACTGGTGTGGGGAGAGATGTCTGCATGGTTCAATGCTATTCCTTCAGGTTGGGGTCCAGGTAGTCCTGTTTGGGATGATTTGGACACTTCCAACAATAGTTTCCTTTTGCAACCTCAGGTTCCTTTTGGTCTCAACAACTCAAATCAGCACCAACAACAAGAACAAGATGGATTCAATGATAATCATGATGCTGCTGATGTTCATATACAACAAGATTGA 1248 0.4431 MDEASNNNNKNSNSGSRFRNMGVDDDSDAHKVFDEMNDPTFFQRAQWKPVFDEASVLHNRPLKKIRSPQRSSSSSPQQPLPSPSSSSSSVPPSSQSSRIVFPFAFDPSQQNPMQMPFSYQYGTRTDTPFMHPPMQPTTHNNQMISFASQSHHPQQQNNMNMMNTVYQPQMLQQQNQQQILQYWSEALNLSPRGRMMMMNNRLRPPSQPLNTTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAAMAYDREAFKLRGENARLNFPELFLNKKDDDNNDKNQEEAPSDAPTTSSPSSSITTTKQVEEVSEGGNANVEKSPIEEGNENSRSVSEGVSQELVWGEMSAWFNAIPSGWGPGSPVWDDLDTSNNSFLLQPQVPFGLNNSNQHQQQEQDGFNDNHDAADVHIQQD* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1627 415 MobiDBLite consensus disorder prediction 1 20 - -
Ahy8g1627 415 SMART rav1_2 214 277 IPR001471 GO:0003700|GO:0006355
Ahy8g1627 415 MobiDBLite consensus disorder prediction 275 339 - -
Ahy8g1627 415 Gene3D AP2/ERF domain 214 272 IPR036955 GO:0003700|GO:0006355
Ahy8g1627 415 SUPERFAMILY DNA-binding domain 214 272 IPR016177 GO:0003677
Ahy8g1627 415 MobiDBLite consensus disorder prediction 289 314 - -
Ahy8g1627 415 MobiDBLite consensus disorder prediction 368 398 - -
Ahy8g1627 415 MobiDBLite consensus disorder prediction 66 96 - -
Ahy8g1627 415 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF053 7 396 - -
Ahy8g1627 415 Pfam AP2 domain 215 263 IPR001471 GO:0003700|GO:0006355
Ahy8g1627 415 MobiDBLite consensus disorder prediction 366 415 - -
Ahy8g1627 415 MobiDBLite consensus disorder prediction 59 96 - -
Ahy8g1627 415 MobiDBLite consensus disorder prediction 1 32 - -
Ahy8g1627 415 ProSiteProfiles AP2/ERF domain profile. 214 271 IPR001471 GO:0003700|GO:0006355
Ahy8g1627 415 MobiDBLite consensus disorder prediction 399 415 - -
Ahy8g1627 415 CDD AP2 213 273 IPR001471 GO:0003700|GO:0006355
Ahy8g1627 415 PRINTS Ethylene responsive element binding protein signature 215 226 IPR001471 GO:0003700|GO:0006355
Ahy8g1627 415 PRINTS Ethylene responsive element binding protein signature 237 253 IPR001471 GO:0003700|GO:0006355
Ahy8g1627 415 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 7 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1627 Ahy-Chr8 33471569 33473948 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g1627 53 371 AP2-EREBP Transcription Factor Family AT4G28140 44.099 4.93e-64 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Ahy8g1627 AP2 2.70E-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1627 - - gmx:100101898 341.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0862 18 10347005 10349435 Ahy8g1627 8 33471569 33473948 hybridization