Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1615 ATGGGGTGTTGTGTCTCAACAAGCAGTAAGAGCAGTTGTAGTAGTAAGAGCAATGGAGACTCAGATTCTCCATCTTGTTTAGAAATCGGTTTCTGTGGTCAAAAGAAAGCAAGGAGAACATTCTCTGATCATGTTGTTTCTCTGCATCAGTTATCATCCTTACCAAACAGGATTTTCTCCAATGGAAAGAGCCGGTCTTCTTGCATATTTACGCAGCAGGGTCGTAAGGGTGTTAATCAGGATGCCATGATTGTATGGGAAGATTTCATGGCAGAAGATGTGACCTTCTGTGGTGTATTTGATGGCCATGGTCCTCATGGTCACCTTGTTGCACGCAAAGTTAGGGATTCCCTGCCTATCAAACTTCTTTCTTTTTTGCATTCCGGTGAATCGAGGCGAAACGGATCAGGGAAAGCTTCTTTCAAAGGGAATATAAAGCCTGACACTGAAGAGTCTGAGAAAGATTTCTCTGATGAGGATAAACTAAATTCCATGTGGAGAGAAGCTTTCATGAAGGCATATAAGGCCATGGACAAAGAGCTGAGGTCTCATCCGAATCTGGATTGTTTCTGTAGTGGGAGCACGGCTGTAACCATAGTGAAGCAGGGATCAAATCTGTTCATGAGCAACATAGGGGATTCCCGAGCAATCATGGGATCCAAGGACAGCAATGACTCCATGGTGGCAATTCAGTTGACAATTGATTTGAAACCTGATTTGCCAAGGGAAGCTGAAAGAATCAAAAGGTGCAAGGGCAGGGTATTTGCCTTGCAAGATGAACCAGAAGTTCCAAGGGTGTGGTTACCTTTTGATGATGCACCTGGATTAGCAATGGCTAGAGCATTTGGCGATTTTTGTTTGAAGGATTACGGTGTCATTTCTATACCAGAATTTTCTCACCGGCTTCTTACAGACAAAGACGAGTTCATTGTTCTTGCCTCGGATGGAGTCTGGGATGTGTTAAGCAATGAAGAGGTGGTTGAGATAGTATCCATGGCACCAACTCGAGCATCAGCAGCAAGGGTTCTGGTGGATTCTGCGGCCCGAGAGTGGAAACTCAAGTATCCCACGTCAAAGATGGATGATTGTGCTGTTGTATGCCTTTTTTTGGATGGTAAAATGGATGTGGAATCTGATTGTGATGAGCAATGCTATTCTTCTGCAACAATCCAAAGCAACCATTCGGGTAATCCAGTTGAGTCAGATGACGGTCAAACGACCGAGCCTTCTTTGCAAAGGAACTTCACTGTACGAACCTCGGAAGAAAAACAAACCTATGGAGGAATATCTGTTGATGGTGAGGATGGAGCTTCAGCAGCAGCAGCAGCAGCTGAAGATCAGAATTGGTCGGGTTTGGAAGGTGTCACCCGAGTAAACTCATTGGTCCAACTTCCTAGATTTTCTGAGGAAAAGCAAAAGCAAGCCTCATAG 1431 0.4458 MGCCVSTSSKSSCSSKSNGDSDSPSCLEIGFCGQKKARRTFSDHVVSLHQLSSLPNRIFSNGKSRSSCIFTQQGRKGVNQDAMIVWEDFMAEDVTFCGVFDGHGPHGHLVARKVRDSLPIKLLSFLHSGESRRNGSGKASFKGNIKPDTEESEKDFSDEDKLNSMWREAFMKAYKAMDKELRSHPNLDCFCSGSTAVTIVKQGSNLFMSNIGDSRAIMGSKDSNDSMVAIQLTIDLKPDLPREAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKDYGVISIPEFSHRLLTDKDEFIVLASDGVWDVLSNEEVVEIVSMAPTRASAARVLVDSAAREWKLKYPTSKMDDCAVVCLFLDGKMDVESDCDEQCYSSATIQSNHSGNPVESDDGQTTEPSLQRNFTVRTSEEKQTYGGISVDGEDGASAAAAAAEDQNWSGLEGVTRVNSLVQLPRFSEEKQKQAS* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1615 476 MobiDBLite consensus disorder prediction 1 24 - -
Ahy8g1615 476 MobiDBLite consensus disorder prediction 130 157 - -
Ahy8g1615 476 SMART PP2C_4 55 368 IPR001932 -
Ahy8g1615 476 Pfam Protein phosphatase 2C 135 347 IPR001932 -
Ahy8g1615 476 SUPERFAMILY PP2C-like 57 372 IPR036457 -
Ahy8g1615 476 Gene3D - 56 372 IPR036457 -
Ahy8g1615 476 CDD PP2Cc 65 370 IPR001932 -
Ahy8g1615 476 PANTHER ALPHABET, ISOFORM E-RELATED 1 462 - -
Ahy8g1615 476 MobiDBLite consensus disorder prediction 389 426 - -
Ahy8g1615 476 ProSiteProfiles PPM-type phosphatase domain profile. 66 370 IPR001932 -
Ahy8g1615 476 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 1 462 - -
Ahy8g1615 476 MobiDBLite consensus disorder prediction 389 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1615 Ahy-Chr8 33303951 33308011 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g1615 1 473 PP2C-type Phosphatase Gene Family AT1G03590 69.811 0.0 649
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1615 - - gmx:100777448 795.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0853 18 10168154 10172195 Ahy8g1615 8 33303951 33308011 hybridization
Ahy8g1615 8 33303951 33308011 Ahy13g1521 13 21416706 21421338 PCT
Ahy13g1521 13 21416706 21421338 Ahy8g1615 8 33303951 33308011 PCT